@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUS5: (2017-12-20 )
MGMQRSGTAIAASFYLKLQRIKPLMLVKPSFKKRLLLTTLLSLSATQIFASNNSEQIPIGKLPEWVIPESYDLDFKIDPAQKGYTGKTTIHLKLVQATDHIWIHGKSLTVKAVNITSAEGVKTKAKYEQASEVDGMSKIKFAKTLPAGQYQLVLDFNVAYDQQLDGIYKIEFEGKPYVMTQMEAISARQSFPSFDEPRFKTPFNIRLTIPSKYSGFANTQQTSEQAEKSGWKTLSFAQTKPLPTYLLALAVGPWQLQKGPDIGATSWRKQPIQLRGIAPDAKAEKMQHALSETPAILKTLEDYFAFGYPFDKLDLLAAPDFAAGAMENPGLITFRDYLMLLDKESPVSFVQNSFNVNAHELAHQWFGDVVTMPWWDDLWLNESFATWMQSKITQKLHPEFNADLERITDTADAMKSDSLVSVRRIRQPILSNADIQTAFDGITYQKGAAVLNMFESYLGEEKFKQGVRNYINKHQYGNATANDLISALAEQSEQSERFAKAMKSFLDQPGVPLINTALQQEGNKVFLNVKQSRYLPVGSKGDARSLWGVPLCVRYEVPNAGSKVQCELVDQAEAKIELKGASLGSWYIPNADAAGYYQFSLPQKEFTRLTAATEKLSNTEQLAYAYAISAAFNHGDINLLAVVDAAKKFANSNSRQISTALFSQLSTIHRHVLKTEAEREHFRKVLANLYLPKLNQLGYVSKTGESAEDSLWRSELVRFLALDIQVPEVRTQLLKQSDALFAQKQLNFAQVTPELLPTILAVRVQEKGQPAFDRLSGELQRVTQPTQRLAILTALGSANQEATRQQARQLILNPLVKVGEVRTVVNSINNYGDEQGGLWSWFKVNHDAVFDRLGKFSAGRFPAMFSGAACIQQQAAQLNDFFAPRTKELVGVERGLKQTKERIQLCESLVAKQDGSIVQQLKL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LEU_A_3(4XO3)
AMPN_ECOLI
[Raw transfer]



BES_A_13(4FKK)
AMPN_PIG
[Raw transfer]



GLU_A_12(4KXD)
AMPE_HUMAN
[Raw transfer]



GLU_A_11(4KXC)
AMPE_HUMAN
[Raw transfer]



PHE_A_5(3B34)
AMPN_ECOLI
[Raw transfer]



ARG_A_11(4KX9)
AMPE_HUMAN
[Raw transfer]



BES_A_12(4FYR)
AMPN_HUMAN
[Raw transfer]



GOL_A_6(4X2U)
AMP1_PLAFQ
[Raw transfer]



GOL_A_10(3B34)
AMPN_ECOLI
[Raw transfer]



ALA_A_13(4FKH)
AMPN_PIG
[Raw transfer]
21 HHSearch 80.2124% 8 * C2 *5AB0 - ERAP2_HUMAN -
8 PsiBlast_PDB 77.5727% 15 - C2 -4FKE - AMPN_PIG -
4 PsiBlast_PDB 77.1827% 16 - C2 -4NZ8 - AMPN_PIG -
6 PsiBlast_PDB 76.6426% 17 - C2 -4OU3 - AMPN_PIG -
10 PsiBlast_PDB 76.5227% 17 - C2 -4FKK 5.0 AMPN_PIG
26 HHSearch 76.3624% 16 - C2 -4FKE - AMPN_PIG -
5 PsiBlast_PDB 76.3026% 16 - C2 -4HOM - AMPN_PIG -
7 PsiBlast_PDB 76.0427% 21 - C2 -5LDS - AMPN_PIG -
9 PsiBlast_PDB 75.9827% 16 - C2 -4FKH 3.8 AMPN_PIG
27 HHSearch 75.6825% 9 - C2 -5MJ6 - LCAP_HUMAN -
23 HHSearch 75.5324% 29 - C2 -4FYR 4.2 AMPN_HUMAN
42 Fugue 75.2424% -41 - C2 -1Z1W - TRF3_THEAC -
13 PsiBlast_PDB 74.9627% 17 - C2 -4F5C - AMPN_PIG -
44 Fugue 74.4625% 17 - C2 -4WZ9 - ? -
25 HHSearch 72.1924% 39 - C2 -4KXD 3.7 AMPE_HUMAN
22 HHSearch 71.9722% 16 - C2 -4WZ9 - ? -
29 HHSearch 71.0524% -33 - C2 -1Z5H - TRF3_THEAC -
24 HHSearch 70.9024% 39 - C2 -4KXC 3.9 AMPE_HUMAN
19 PsiBlast_PDB 68.8625% 48 - C2 -4KX8 - AMPE_HUMAN -
18 PsiBlast_PDB 68.4425% 47 - C2 -4KX7 - AMPE_HUMAN -