@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUU5: (2017-12-20 )
MNAVNASFTDYKVADISLADYGRKEIKLAEAEMPALIGLRKRHAASKPLAGAKILGCIHMTIQTAVLIETLVELGAEVRWTSCNIFSTQDHAAAAIATRGIPVFAWKGETEEEYVWCLEQQINVNGQPWDANMILDDGGDLTALVHEKYPALLERIHGITEETTTGVQRLIEMWKDGTLKVPAINVNDSVTKSKNDNKYGCRHSLNDAIKRATDMLLSGRRALVIGYGDVGKGSAQSLRQEGMVVRVTEVDPICAMQACMDGYEVVSPYKNGVQTGKKEDINHDLLGNTDLVVTTTGNYHVCDAAMLDSLKAGAVVCNIGHFDTEIDTAYLRGYKWVEVKPQVHQVYRSEDENNYLILLSEGRLVNLGNATGHPSRVMDGSFANQVLGQIHLFQEKFADLPASEKAAKIRVEVLPKKLDEEVAAAMVAGFGGVLTQLTQEQADYLGVAVEGPFKSDAYKY

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADN_B_10(3OND)
SAHH_LUPLU
[Raw transfer]




ADN_C_7(5AXA)
SAHH_MOUSE
[Raw transfer]




ARJ_A_5(5AXC)
SAHH_MOUSE
[Raw transfer]




ARJ_C_8(5AXC)
SAHH_MOUSE
[Raw transfer]




3AD_B_8(3ONF)
SAHH_LUPLU
[Raw transfer]




ADE_A_4(5M65)
SAHH_BRAEL
[Raw transfer]




ADE_B_10(5M65)
SAHH_BRAEL
[Raw transfer]




9W1_A_10(5W49)
?
[Raw transfer]




9W1_B_20(5W49)
?
[Raw transfer]




NAD_B_7(3OND)
SAHH_LUPLU
[Raw transfer]




NAD_B_6(3ONF)
SAHH_LUPLU
[Raw transfer]




NAD_C_6(5AXC)
SAHH_MOUSE
[Raw transfer]




NAD_A_3(3GLQ)
SAHH_BURP1
[Raw transfer]




NAD_B_9(5M65)
SAHH_BRAEL
[Raw transfer]




NAD_C_6(5AXB)
SAHH_MOUSE
[Raw transfer]




NAD_A_3(5AXC)
SAHH_MOUSE
[Raw transfer]




NAD_A_3(5AXB)
SAHH_MOUSE
[Raw transfer]




NAD_A_3(5AXC)
SAHH_MOUSE
[Raw transfer]




NAD_A_3(5M65)
SAHH_BRAEL
[Raw transfer]




NAD_C_5(5AXD)
SAHH_MOUSE
[Raw transfer]




NAD_B_5(3GLQ)
SAHH_BURP1
[Raw transfer]




NAD_A_3(5AXA)
SAHH_MOUSE
[Raw transfer]




NAD_A_3(3D64)
SAHH_BURP1
[Raw transfer]




NAD_E_5(1LI4)
SAHH_HUMAN
[Raw transfer]




NAD_A_3(5AXD)
SAHH_MOUSE
[Raw transfer]




NAD_A_3(3D64)
SAHH_BURP1
[Raw transfer]




NAD_C_6(5AXA)
SAHH_MOUSE
[Raw transfer]




NAD_B_4(3D64)
SAHH_BURP1
[Raw transfer]




NAI_B_5(4YVF)
SAHH_HUMAN
[Raw transfer]




NAI_A_3(4YVF)
SAHH_HUMAN
[Raw transfer]




NAD_B_12(5W49)
?
[Raw transfer]




NAD_B_12(5W49)
?
[Raw transfer]




NAD_A_3(5W49)
?
[Raw transfer]




NAI_B_5(5TOW)
?
[Raw transfer]




IPA_Q_17(1LI4)
SAHH_HUMAN
[Raw transfer]




116 HHSearch 88.8650% -96 - C4 -3GVP - SAHH3_HUMAN -
6 PsiBlast_PDB 87.4756% -75 - C4 -5W49 8.5 ?
110 HHSearch 86.9658% -69 - C4 -5AXC 11.1 SAHH_MOUSE
34 PsiBlast_CBE 86.8656% -73 - C4 -4YVF 6.3 SAHH_HUMAN
111 HHSearch 86.8558% -76 - C4 -5W49 7.7 ?
29 PsiBlast_CBE 86.6056% -73 - C4 -5W4B - ? -
19 PsiBlast_PDB 86.5255% -73 - C4 -4PFJ - SAHH_HUMAN -
115 HHSearch 86.4950% -90 - C4 -3GVP - SAHH3_HUMAN -
70 PsiBlast_CBE 86.4655% -70 - C4 -4PGF - SAHH_HUMAN -
28 PsiBlast_CBE 86.4656% -71 - C4 -5W4B - ? -
33 PsiBlast_CBE 86.2856% -75 - C4 -5W49 7.7 ?
9 PsiBlast_PDB 86.1756% -72 - C4 -4YVF 6.5 SAHH_HUMAN
37 PsiBlast_CBE 86.1456% -69 - C4 -3NJ4 - SAHH_HUMAN -
32 PsiBlast_CBE 86.0656% -74 - C4 -5W4B - ? -
8 PsiBlast_PDB 85.9056% -67 - C4 -1LI4 9.6 SAHH_HUMAN
36 PsiBlast_CBE 85.8056% -70 - C4 -3NJ4 - SAHH_HUMAN -
30 PsiBlast_CBE 85.7956% -73 - C4 -5W4B - ? -
71 PsiBlast_CBE 85.6256% -72 - C4 -4PFJ - SAHH_HUMAN -
10 PsiBlast_PDB 85.5656% -67 - C4 -3NJ4 - SAHH_HUMAN -
38 PsiBlast_CBE 85.3054% -74 - C4 -3G1U - ? -
4 PsiBlast_PDB 85.0556% -68 - C4 -5AXC 11.2 SAHH_MOUSE
24 PsiBlast_CBE 84.9956% -70 - C4 -5AXD 10.7 SAHH_MOUSE
25 PsiBlast_CBE 84.9256% -68 - C4 -5AXC 10.9 SAHH_MOUSE
26 PsiBlast_CBE 84.8156% -70 - C4 -5AXB 11.1 SAHH_MOUSE
27 PsiBlast_CBE 84.7556% -71 - C4 -5AXA 10.4 SAHH_MOUSE
2 PsiBlast_PDB 84.4556% -69 - C4 -5AXA 10.6 SAHH_MOUSE
5 PsiBlast_PDB 84.2356% -68 - C4 -5AXD 10.9 SAHH_MOUSE
3 PsiBlast_PDB 83.9756% -69 - C4 -5AXB 11.2 SAHH_MOUSE
103 HHSearch 81.5456% -28 - C4 -3D64 9.4 SAHH_BURP1
107 HHSearch 80.7954% -19 - C4 -3OND 11.9 SAHH_LUPLU
106 HHSearch 79.7954% -17 - C4 -3ONF 11.8 SAHH_LUPLU
93 PsiBlast_CBE 79.6551% -20 - C4 -3D64 9.4 SAHH_BURP1
92 PsiBlast_CBE 78.5251% -21 - C4 -3D64 9.5 SAHH_BURP1
91 PsiBlast_CBE 76.4251% -14 - C4 -3GLQ 12.0 SAHH_BURP1
90 PsiBlast_CBE 76.2751% -14 - C4 -3GLQ 12.1 SAHH_BURP1
80 PsiBlast_CBE 76.2252% 2 - C4 -5M65 11.8 SAHH_BRAEL
81 PsiBlast_CBE 76.0552% -1 - C4 -5M65 11.5 SAHH_BRAEL
114 HHSearch 76.0038% -78 - C4 -5TOW 10.5 ?