@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUX3: (2017-12-21 )
MTDALVLRDLSKTYRNGFQALKGINLTVPEGEFYALLGPNGAGKSTTIGIISSLTKKTSGTVEIFGHNLDTHPSLAKQQLGVVPQEFNFGQFEKAFDILVTQAGYYGIHRKIAEKRAEHYLEKLGLWEKRNIQARMLSGGMKRRLMIARAMMHEPKLLILDEPTAGVDIELRRSMWDFLTEMNENGTSIILTTHYLEEAEMLCRQIAIIDRGVIKEDTSMKSFLNQLSEESFIFDLAEPIAPLQLNIIGVKFNLIDGSTLEVTMDKAHTLNDLFQLLESQGIRVRSMRNKSNRLEELFVKMVEKNLEGAAK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]



ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
1 PsiBlast_PDB 80.5531% -94 - C1 -4YER 6.4 ?
2 PsiBlast_PDB 80.0737%-129 - C1 -1VPL - ? -
64 HHSearch 72.1227%-116 - C1 -2AWN - MALK_ECOLI -
82 Fugue 70.4324% -3 - C1 -3TUZ - METN_ECOLI -
63 HHSearch 69.8627%-118 - C1 -3RLF - MALK_ECOLI -
89 Fugue 66.7328% -3 - C1 -3B60 - MSBA_SALTY -
85 Fugue 66.1121% -71 - C1 -1Z47 - ? -
81 HHSearch 65.6830% -6 * C1 *3TUI - METN_ECOLI -
4 PsiBlast_PDB 64.4831% 2 - C1 -3TUI - METN_ECOLI -
69 HHSearch 63.8630% -32 - C1 -5X3X - CBIO_RHOCB -
5 PsiBlast_PDB 63.8031% 1 - C1 -3TUZ - METN_ECOLI -
7 PsiBlast_PDB 63.7435% -8 - C1 -2PCL - LOLD_AQUAE -
73 HHSearch 63.5930% -31 - C1 -5X40 7.3 CBIO_RHOCB
24 PsiBlast_CBE 62.6331% 6 - C1 -3TUI - METN_ECOLI -
80 HHSearch 62.4426% -98 - C1 -1Z47 - ? -
74 HHSearch 62.3726%-100 - C1 -1Z47 - ? -
21 PsiBlast_CBE 62.1131% 2 - C1 -3TUZ - METN_ECOLI -
68 HHSearch 62.0726%-101 - C1 -2YYZ - ? -
26 PsiBlast_CBE 61.9931% 9 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 61.8831% 9 - C1 -3TUZ - METN_ECOLI -
61 HHSearch 45.6832% -4 - C1 -4YER 4.3 ?