@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUY5: (2017-12-21 )
MAAFNVERITYVHHWNDTLFSFKTTRDASLRFKNGQFVMIGLEVNGKPLMRAYSIASANYEEELEFFSIKVQDGPLTSILQKVQVGDEILVSKKPTGTLVHDDLLPGKNLYLLSSGTGLAPFLSIIRDPETYERFEKVIVVHGTRYISELAYQDLILNELPNNEFFEELGIKDKLVYYPTVTREPFHTQGRVTTAIETGALFEKIGLPRFNRETDRAMLCGSPAFLKDVAALLDQHGLVESPRMGEMGDYVIERAFVEK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_12(2EIX)
?
[Raw transfer]




FAD_B_2(1A8P)
FENR_AZOVI
[Raw transfer]




FAD_D_8(2BGJ)
?
[Raw transfer]




FAD_C_7(2BGJ)
?
[Raw transfer]




FAD_A_3(3CRZ)
?
[Raw transfer]




FAD_B_6(2BGJ)
?
[Raw transfer]




FAD_A_2(4B4D)
?
[Raw transfer]




FAD_A_3(2BGI)
?
[Raw transfer]




FAD_A_4(5THX)
?
[Raw transfer]




FAD_C_9(2VNK)
?
[Raw transfer]




FAD_A_5(2BGJ)
?
[Raw transfer]




FAD_D_11(2VNK)
?
[Raw transfer]




FAD_A_3(4K1X)
?
[Raw transfer]




FAD_A_2(4B4D)
?
[Raw transfer]




FAD_B_5(4K1X)
?
[Raw transfer]




FAD_A_2(2VNJ)
?
[Raw transfer]




FAD_A_3(2QDX)
?
[Raw transfer]




FAD_A_2(2VNH)
?
[Raw transfer]




FAD_B_5(4K1X)
?
[Raw transfer]




FAD_A_2(2VNI)
?
[Raw transfer]




FAD_A_5(2VNK)
?
[Raw transfer]




FAD_B_7(2VNK)
?
[Raw transfer]




FAD_A_3(2QDX)
?
[Raw transfer]




A2P_A_3(2VNI)
?
[Raw transfer]




FAD_B_4(4FK8)
?
[Raw transfer]




FAD_A_3(2BGI)
?
[Raw transfer]




FAD_A_3(4FK8)
?
[Raw transfer]




FAD_B_4(4FK8)
?
[Raw transfer]




CO2_A_7(2BGI)
?
[Raw transfer]




GOL_B_11(2EIX)
?
[Raw transfer]




TRS_B_15(2XNJ)
FENR_ECOLI
[Raw transfer]




TRS_A_5(2XNJ)
FENR_ECOLI
[Raw transfer]




1 PsiBlast_PDB 95.9268%-118 - C4 -1A8P 11.6 FENR_AZOVI
3 PsiBlast_PDB 95.5770%-112 - C4 -3CRZ 13.3 ?
2 PsiBlast_PDB 95.1570%-112 - C4 -2QDX 13.7 ?
4 PsiBlast_PDB 92.8363%-130 - C4 -5THX 12.7 ?
5 PsiBlast_PDB 91.7760%-125 - C4 -4B4D 13.8 ?
21 PsiBlast_CBE 91.5560%-123 - C4 -4FK8 12.4 ?
7 PsiBlast_PDB 91.2460%-119 - C4 -4FK8 12.4 ?
34 HHSearch 85.5068% -62 - C4 -2QDX 13.7 ?
36 HHSearch 81.6959% -51 - C4 -4B4D 13.8 ?
24 PsiBlast_CBE 81.2252% -34 - C4 -2VNK 12.5 ?
22 PsiBlast_CBE 80.8852% -36 - C4 -2VNK 12.5 ?
12 PsiBlast_PDB 80.5652% -36 - C4 -2VNJ 12.2 ?
23 PsiBlast_CBE 80.0252% -35 - C4 -2VNK 12.5 ?
13 PsiBlast_PDB 79.7252% -34 - C4 -2VNK 12.7 ?
9 PsiBlast_PDB 79.2152% -32 - C4 -2BGJ 12.8 ?
8 PsiBlast_PDB 79.2152% -34 - C4 -2BGI 12.6 ?
40 HHSearch 79.1853% -20 - C4 -2BGI 12.3 ?
14 PsiBlast_PDB 78.9651% -34 - C4 -4K1X 11.0 ?
25 PsiBlast_CBE 78.8952% -30 - C4 -2BGJ 12.2 ?
11 PsiBlast_PDB 78.8852% -35 - C4 -2VNI 12.0 ?
27 PsiBlast_CBE 78.6552% -31 - C4 -2BGJ 12.4 ?
26 PsiBlast_CBE 78.6152% -31 - C4 -2BGJ 12.6 ?
10 PsiBlast_PDB 78.3652% -38 - C4 -2VNH 12.3 ?
28 PsiBlast_CBE 78.0251% -32 - C4 -4K1X 10.0 ?
41 HHSearch 76.4958% -58 - C4 -4FK8 12.4 ?
46 HHSearch 76.1553% -21 - C4 -4K1X 10.5 ?