@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VV48: (2017-12-22 )
MKFSKILVANRGEIAVRVMQTAKAMGYQTVAVYSDADRNARHVQEADEAVYIGASKVSESYLSIAKIIEACKKTGADAVHPGYGFLSENTDFAQACIDNQITFIGPTASAIELMGSKRLSKIAMIEAGVPCVPGYEGDRQDLEYLATQAEQIGFPIMVKASAGGGGRGMRLVQQASELFEALQTARSEAENAFGSGELILEKAVIAPRHVEIQVFGDTHGNYVYLFERDCSIQRRHQKVVEEAPCPVMTPELRQKMGEAAVAAAKTCAYVGAGTVEFLLDASGAFYFLEMNTRLQVEHPVTELITGLDLVEWQLRVANGEQLPLKQQELTLNGHAIEVRLYAEDPRQDFLPQTGKILRWKPAALPNVRIDHGMLATDEVSPFYDPMVAKVIAYGKTREDAIRLLARAVDDSVLLGVNSNKQFLVNLLRHPVVVAGDTNTAFIQQHFKNDPSLHYQVLSLETLAIAAALFSQSKGPAVWQTGLGVPLPLKLQTADQQIQLQLSSVNNTFTVQFCEQVVCIDVLEKTPEQLVYLIDGVRRRVQYVLDDDQLYLDRDNGNVLIRNMTYAAPEATDVAGDGKIRAPMDGAVVNILVNEGDQVVKGQTLLILEAMKIQQQIKSDVDGVVDEILGQQGQQVKKRQMLFSIQI

Atome Classification :

(58 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ACP_A_3(4MV8)
ACCC_HAEIN
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




ANP_A_7(3OUU)
?
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




ACP_A_2(4MV3)
ACCC_HAEIN
[Raw transfer]




ADP_A_3(4MV1)
ACCC_HAEIN
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]




1 PsiBlast_PDB 74.8248% -49 - C3 -3U9S - ? -
2 PsiBlast_PDB 74.2248% -56 - C3 -3U9T - ? -
124 HHSearch 73.9848% -52 - C3 -3U9S - ? -
126 HHSearch 73.2842% -65 - C3 -3N6R - ? -
21 PsiBlast_CBE 72.4841% -61 - C3 -3N6R - ? -
23 PsiBlast_CBE 72.2841% -60 - C3 -3N6R - ? -
125 HHSearch 72.2548% -60 - C3 -3U9T - ? -
22 PsiBlast_CBE 72.1441% -59 - C3 -3N6R - ? -
145 HHSearch 69.8844% -91 - C3 -3OUU 5.7 ?
146 HHSearch 69.6744% -93 - C3 -3OUZ 7.1 ?
25 PsiBlast_CBE 69.3241% -58 - C3 -3N6R - ? -
5 PsiBlast_PDB 69.0446% -96 - C3 -1ULZ - ? -
148 Fugue 68.8439% -62 - C3 -3N6R - ? -
24 PsiBlast_CBE 68.5441% -57 - C3 -3N6R - ? -
3 PsiBlast_PDB 68.3141% -58 - C3 -3N6R - ? -
50 PsiBlast_CBE 67.9948%-101 - C3 -4RZQ 3.8 ACCC_HAEIN
149 Fugue 67.8047% 5 - C3 -3U9T - ? -
4 PsiBlast_PDB 66.7947% -51 - C3 -2VPQ 6.4 ?
26 PsiBlast_CBE 66.4847% -49 - C3 -2VPQ 5.5 ?
20 PsiBlast_PDB 66.4648% -99 - C3 -4MV9 - ACCC_HAEIN -
142 HHSearch 66.4047% -48 - C3 -2VPQ 5.5 ?
55 PsiBlast_CBE 66.4048% -25 - C3 -2W71 6.7 ACCC_ECOLI
91 PsiBlast_CBE 66.1347% -30 - C3 -3G8D 5.3 ACCC_ECOLI
66 PsiBlast_CBE 66.0048% -26 - C3 -2W6N 4.7 ACCC_ECOLI
76 PsiBlast_CBE 65.9848% -28 - C3 -2V58 6.2 ACCC_ECOLI
90 PsiBlast_CBE 65.8847% -28 - C3 -3RV4 8.2 ACCC_ECOLI
65 PsiBlast_CBE 65.8348% -30 - C3 -2W6O 3.7 ACCC_ECOLI
73 PsiBlast_CBE 65.7348% -25 - C3 -2V5A 6.1 ACCC_ECOLI
15 PsiBlast_PDB 65.7347% -27 - C3 -3JZI 8.2 ACCC_ECOLI
88 PsiBlast_CBE 65.7247% -23 - C3 -1DV2 4.3 ACCC_ECOLI
57 PsiBlast_CBE 65.7248% -27 - C3 -2W70 3.6 ACCC_ECOLI
79 PsiBlast_CBE 65.7148% -26 - C3 -2J9G 6.0 ACCC_ECOLI
48 PsiBlast_CBE 65.6747% -29 - C3 -3JZI 8.8 ACCC_ECOLI
56 PsiBlast_CBE 65.6448% -27 - C3 -2W71 6.6 ACCC_ECOLI
49 PsiBlast_CBE 65.4847% -24 - C3 -3JZF 9.1 ACCC_ECOLI
58 PsiBlast_CBE 65.3148% -26 - C3 -2W70 4.0 ACCC_ECOLI
85 PsiBlast_CBE 65.3048% -28 - C3 -3RUP 7.9 ACCC_ECOLI
86 PsiBlast_CBE 65.2548% -23 - C3 -3G8C 6.2 ACCC_ECOLI
83 PsiBlast_CBE 65.2548% -28 - C3 -3RV3 8.0 ACCC_ECOLI
71 PsiBlast_CBE 65.2148% -30 - C3 -2VR1 4.6 ACCC_ECOLI
87 PsiBlast_CBE 65.2048% -27 - C3 -3G8C 6.0 ACCC_ECOLI
89 PsiBlast_CBE 65.1447% -29 - C3 -1DV2 5.7 ACCC_ECOLI
75 PsiBlast_CBE 65.1248% -26 - C3 -2V59 5.5 ACCC_ECOLI
78 PsiBlast_CBE 65.1148% -28 - C3 -2J9G 7.2 ACCC_ECOLI
63 PsiBlast_CBE 65.0748% -25 - C3 -2W6P 5.3 ACCC_ECOLI
67 PsiBlast_CBE 65.0648% -26 - C3 -2W6N 4.7 ACCC_ECOLI
77 PsiBlast_CBE 64.9848% -24 - C3 -2V58 6.0 ACCC_ECOLI
18 PsiBlast_PDB 64.9648% -25 - C3 -4MV4 4.6 ACCC_HAEIN
93 PsiBlast_CBE 64.9145% -27 - C3 -2VQD 7.2 ACCC_PSEAE
84 PsiBlast_CBE 64.9148% -29 - C3 -3RUP 6.8 ACCC_ECOLI
64 PsiBlast_CBE 64.8148% -23 - C3 -2W6O 3.3 ACCC_ECOLI
74 PsiBlast_CBE 64.7848% -25 - C3 -2V59 5.4 ACCC_ECOLI
82 PsiBlast_CBE 64.7548% -26 - C3 -3RV3 6.3 ACCC_ECOLI
16 PsiBlast_PDB 64.6848% -27 - C3 -4MV1 5.0 ACCC_HAEIN
17 PsiBlast_PDB 64.5248% -25 - C3 -4MV3 3.8 ACCC_HAEIN
19 PsiBlast_PDB 63.9448% -26 - C3 -4MV8 5.1 ACCC_HAEIN
150 Fugue 62.6833% 9 - C3 -3VA7 2.1 ?
106 PsiBlast_CBE 57.3340% -28 - C3 -3VA7 2.1 ?