Binding Site Information :
Doc...
Information extracted from the bests complexes created by comparative docking.



Prediction Binding Site :


Binding Site Prediction
[Download fasta file] - [Download text file]

Binding Site Number :C4_S1
Best Complexes choosen after comparative docking [pKd > 3] : 4 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C4_S1
Complex: ANP_A_3(1P9W) / Model_1(1P9W/A) = [6.8] Download1505.4810.03MMQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQEFNSLLSTSYAGDTGESQQVAAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQLVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEKQVFQHISHEPSLKLPEAQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSGKTTLEEVLRVTNEASEA
Complex: ACP_C_9(3JVV) / Model_58(3JVV/C) = [5.8] Download1452.8220.29MMQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQEFNSLLSTSYAGDTGESQQVAAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQLVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEKQVFQHISHEPSLKLPEAQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSGKTTLEEVLRVTNEASEA
Complex: ADP_C_8(5TSG) / Model_27(5TSG/C) = [5.1] Download1209.1715.86MMQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQEFNSLLSTSYAGDTGESQQVAAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQLVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEKQVFQHISHEPSLKLPEAQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSGKTTLEEVLRVTNEASEA
Complex: ATP_A_2(2EWW) / Model_6(2EWW/A) = [5.1] Download1629.5719.75MMQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQEFNSLLSTSYAGDTGESQQVAAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQLVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEKQVFQHISHEPSLKLPEAQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSGKTTLEEVLRVTNEASEA
Consensus
[pKd Mean = 5.70]
-1449
(s=152)
16
(s=4)
MMQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQEFNSLLSTSYAGDTGESQQVAAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQLVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEKQVFQHISHEPSLKLPEAQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSGKTTLEEVLRVTNEASEA



Statistical distribution of contacts between receptors and ligands in all complexes :
(only contacts < 8A are taken into consideration)


Res_NameRes_NumRes_AtNb_ContactsNb_ComplexesNb[At_Ligand]
SER130OG1848[O], 10[C],
ASP131OD2441[O], 3[C],
ASP131CG141[O],
ASP131OD1242[O],
ARG146CG141[O],
ASP148OD2241[N], 1[C],
ASP148OD11544[N], 7[C], 4[O],
ASP148CG442[C], 1[O], 1[N],
ARG187NE242[O],
ARG187CZ242[O],
ASP198CG141[O],
ASP198OD2341[C], 2[O],
ARG200NE541[P], 4[O],
ARG200CZ1142[P], 1[N], 5[O], 3[C],
ARG215CZ2044[P], 4[C], 12[O],
ARG215CD443[O], 1[P],
ARG215NE1249[O], 3[P],
LEU216CG242[O],
LEU216CD1443[O], 1[C],
LEU217CD1743[O], 4[C],
LEU217CD2741[P], 1[C], 5[O],
LEU217CG341[O], 2[C],
ASP218CG2942[P], 13[C], 12[O], 2[N],
ASP218OD12942[P], 2[N], 12[C], 13[O],
ASP218OD23943[P], 5[N], 16[O], 15[C],
ARG223CD1345[N], 1[O], 7[C],
ARG223CG1345[N], 7[C], 1[O],
ARG223CZ1341[O], 7[C], 5[N],
ARG223NE1545[N], 8[C], 2[O],
LEU224CG2148[N], 2[O], 11[C],
LEU224CD128415[C], 3[O], 10[N],
LEU224CD21246[C], 1[O], 5[N],
HIS228CD21341[O], 7[C], 5[N],
HIS228CG744[C], 3[N],
HIS228CE1944[N], 1[O], 4[C],
HIS228ND1542[N], 3[C],
HIS228NE21345[N], 7[C], 1[O],
LEU229CD135418[C], 17[N],
LEU229CG40420[N], 20[C],
LEU229CD23941[O], 21[C], 17[N],
LEU231CD2946[N], 3[C],
LEU231CD1242[N],
LEU231CG444[N],
VAL252CG1746[O], 1[P],
PRO255CG444[O],
PRO255CD444[O],
THR256OG13448[P], 1[N], 1[C], 24[O],
THR256CG23748[P], 1[N], 3[C], 25[O],
SER258OG4843[N], 27[O], 8[C], 10[P],
LYS260CE43411[P], 1[N], 30[O], 1[C],
LYS260CD39411[P], 1[N], 1[C], 26[O],
LYS260NZ49411[P], 1[N], 3[C], 34[O],
LYS260CG49411[P], 2[C], 35[O], 1[N],
THR261CG25348[C], 33[O], 1[N], 11[P],
THR261OG15441[N], 35[O], 7[C], 11[P],
THR262CG293420[N], 40[C], 29[O], 4[P],
THR262OG111149[P], 40[O], 41[C], 21[N],
THR263CG21742[P], 6[N], 4[C], 5[O],
THR263OG135413[N], 8[O], 12[C], 2[P],
LEU264CD2141[O],
LEU264CG444[O],
LEU264CD1541[P], 4[O],
TYR265CD1242[O],
TYR265CG341[P], 2[O],
TYR265CE2847[O], 1[P],
TYR265CZ441[P], 3[O],
TYR265CD2741[P], 6[O],
TYR265CE1444[O],
GLU282OE1242[O],
PRO284CD443[O], 1[P],
PRO284CG141[O],
GLU286CG3448[P], 2[C], 24[O],
GLU286OE145410[P], 5[C], 29[O], 1[N],
GLU286OE24941[N], 5[C], 32[O], 11[P],
GLU286CD4744[C], 31[O], 1[N], 11[P],
TYR287CD1343[O],
TYR287CD2942[P], 6[O], 1[C],
TYR287CG242[O],
TYR287CE22142[N], 11[O], 6[C], 2[P],
TYR287CE11742[P], 10[O], 5[C],
TYR287CZ2642[P], 8[C], 14[O], 2[N],
MET321CE141[O],
GLU324OE21241[N], 8[O], 3[P],
GLU324CD1141[N], 8[O], 2[P],
GLU324OE11243[P], 1[N], 8[O],
GLU324CG441[P], 3[O],
THR347CG21644[P], 12[O],
THR347OG11543[P], 12[O],
HIS349CE113410[O], 3[P],
HIS349CD2942[P], 1[C], 6[O],
HIS349NE21644[P], 1[C], 11[O],
HIS349CG746[O], 1[P],
HIS349ND11143[P], 8[O],
GLN380OE128410[N], 14[C], 4[O],
GLN380NE26048[P], 13[N], 21[O], 18[C],
GLN380CD40413[O], 14[C], 11[N], 2[P],
GLN380CG1948[C], 4[O], 7[N],
LEU382CG90420[N], 40[C], 24[O], 6[P],
LEU382CD279420[N], 39[C], 18[O], 2[P],
LEU382CD1101420[N], 33[O], 40[C], 8[P],
THR385OG11044[C], 6[N],
THR385CG2241[C], 1[N],
ARG432CG4346[O], 24[C], 13[N],
ARG432CZ55412[N], 30[C], 12[O], 1[P],
ARG432CD48410[O], 26[C], 12[N],
ARG432NE54413[N], 30[C], 11[O],
THR433CG21346[N], 7[C],
THR433OG120410[N], 10[C],
TYR436CZ1949[C], 10[N],
TYR436CD2444[N],
TYR436CE11649[N], 7[C],
TYR436CD1642[C], 4[N],
TYR436CE21246[C], 6[N],
TYR436CG242[N],
LYS476NZ141[N],
Total = 115



Download csv file of statistical distribution of contacts