@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VV70: (2017-12-22 )
MMQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQEFNSLLSTSYAGDTGESQQVAAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQLVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEKQVFQHISHEPSLKLPEAQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSGKTTLEEVLRVTNEASEA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_C_8(5TSG)
?
[Raw transfer]




ACP_C_9(3JVV)
PILT_PSEAE
[Raw transfer]




ADP_B_5(5TSG)
?
[Raw transfer]




ANP_A_3(1P9W)
GSPE_VIBCH
[Raw transfer]




ADP_A_2(5FL3)
?
[Raw transfer]




ATP_A_2(2EWW)
?
[Raw transfer]




ACP_C_9(3JVV)
PILT_PSEAE
[Raw transfer]




ADP_A_2(5FL3)
?
[Raw transfer]




ADP_G_7(2EWV)
?
[Raw transfer]




FMT_D_11(5TSG)
?
[Raw transfer]




1 PsiBlast_PDB 90.0765%-123 - C4 -1P9W 6.8 GSPE_VIBCH
2 PsiBlast_PDB 76.3040% -90 - C4 -5TSG 5.8 ?
24 PsiBlast_CBE 75.8940% -92 - C4 -5TSH - ? -
56 HHSearch 75.4845% -86 * C4 *5IT5 - ? -
27 PsiBlast_CBE 75.4040% -85 - C4 -5TSG 5.1 ?
53 HHSearch 75.1040% -93 - C4 -5TSH - ? -
55 HHSearch 75.0645% -86 - C4 -5IT5 - ? -
3 PsiBlast_PDB 74.9340% -92 - C4 -5TSH - ? -
21 PsiBlast_CBE 74.1940% -87 - C4 -5TSH - ? -
4 PsiBlast_PDB 74.0245% -77 - C4 -5IT5 - ? -
30 PsiBlast_CBE 73.7545% -76 - C4 -5IT5 - ? -
29 PsiBlast_CBE 73.7445% -75 - C4 -5IT5 - ? -
23 PsiBlast_CBE 73.3440% -91 - C4 -5TSH - ? -
25 PsiBlast_CBE 73.1540% -92 - C4 -5TSH - ? -
32 PsiBlast_CBE 73.0545% -76 - C4 -5IT5 - ? -
28 PsiBlast_CBE 72.7445% -74 - C4 -5IT5 - ? -
31 PsiBlast_CBE 72.6745% -78 - C4 -5IT5 - ? -
26 PsiBlast_CBE 71.6340% -79 - C4 -5TSG 3.9 ?
22 PsiBlast_CBE 65.7340% -25 - C4 -5TSH - ? -
52 HHSearch 62.9940% -11 - C4 -5TSH - ? -
58 HHSearch 46.6933% 7 - C4 -3JVV 5.8 PILT_PSEAE
57 HHSearch 46.3532% 3 - C4 -5FL3 7.0 ?
33 PsiBlast_CBE 43.1235% -6 - C4 -3JVV 5.3 PILT_PSEAE
6 PsiBlast_PDB 41.1835% 2 - C4 -2EWW 5.1 ?
9 PsiBlast_PDB 40.7737% -6 - C4 -5FL3 6.2 ?
5 PsiBlast_PDB 38.6235% -0 - C4 -2EWV 4.4 ?