@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VV85: (2017-12-23 )
MRVTMSLEALTTEALAAIAAAQDLVALDQVRVQFTGKKSQLAEQSKALGKMDPEERKVQGAAIHAVRETINNALTERQTALQQAALAQKLASETIDITLPGRGQRVGTVHPVTQVQERICQFFTKAGFTVATGPEVEDDYHNFEALNIPGHHPARAMHDTFYFDANHLLRTHTSGVQIRTMETSQPPIRIVCPGRVYRCDSDQTHSPMFHQIEGLYVAENTSFAELKGLLINLLNEFFEKDLKVRFRPSYFPFTEPSAEVDIMDERGRWLEVLGCGMVHPNVLRAAGIDPDKYKGFAFGLGVERFAMLRYGINDLRMFYQNDVRFLRQFA

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]




FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]




YSA_A_5(2ALY)
SYFA_THETH
[Raw transfer]




FA5_A_5(1JJC)
SYFA_THET8
[Raw transfer]




FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]




FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]




TYR_A_5(2AMC)
SYFA_THETH
[Raw transfer]




PHE_A_3(4TVA)
SYFA_THETH
[Raw transfer]




PHE_A_4(1B70)
SYFA_THETH
[Raw transfer]




PHE_A_2(5MGU)
SYFM_HUMAN
[Raw transfer]




PHE_A_2(5MGW)
SYFM_HUMAN
[Raw transfer]




PHE_A_2(5MGW)
SYFM_HUMAN
[Raw transfer]




200_A_5(2AKW)
SYFA_THETH
[Raw transfer]




PHE_A_2(5MGH)
SYFM_HUMAN
[Raw transfer]




200_A_5(2AKW)
SYFA_THETH
[Raw transfer]




DAH_A_3(3TEH)
SYFA_THETH
[Raw transfer]




GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]




MTY_A_3(3HFZ)
SYFA_THET8
[Raw transfer]




MTY_A_2(3HFV)
SYFM_HUMAN
[Raw transfer]




DAH_A_2(3TEG)
SYFM_HUMAN
[Raw transfer]




44 HHSearch 83.1463%-100 - C1 -3PCO - SYFA_ECOLI -
24 PsiBlast_CBE 82.6462% -96 - C1 -4P73 - SYFA_PSEAE -
21 PsiBlast_CBE 82.4063%-101 - C1 -3PCO - SYFA_ECOLI -
4 PsiBlast_PDB 81.7162% -84 - C1 -4P73 - SYFA_PSEAE -
25 PsiBlast_CBE 79.4162% -74 - C1 -4P72 - SYFA_PSEAE -
22 PsiBlast_CBE 79.1462% -82 - C1 -4P75 - SYFA_PSEAE -
6 PsiBlast_PDB 78.8862% -82 - C1 -4P75 - SYFA_PSEAE -
42 HHSearch 78.7265% -66 - C1 -4P72 - SYFA_PSEAE -
45 HHSearch 78.6563%-118 - C1 -3PCO - SYFA_ECOLI -
1 PsiBlast_PDB 78.5363%-119 - C1 -3PCO - SYFA_ECOLI -
23 PsiBlast_CBE 77.7862% -74 - C1 -4P74 - SYFA_PSEAE -
5 PsiBlast_PDB 77.5862% -86 - C1 -4P74 - SYFA_PSEAE -
3 PsiBlast_PDB 77.2962% -85 - C1 -4P72 - SYFA_PSEAE -
41 HHSearch 76.9765% -67 - C1 -4P74 - SYFA_PSEAE -
9 PsiBlast_PDB 71.6743% -42 - C1 -1EIY - SYFA_THET8 -
61 Fugue 71.0446% -25 - C1 -1EIY - SYFA_THET8 -
12 PsiBlast_PDB 70.2843% -44 - C1 -2IY5 - SYFA_THETH -
49 HHSearch 70.2256% -22 - C1 -2RHS - SYFA_STAHJ -
15 PsiBlast_PDB 70.1543% -55 - C1 -4TVA 4.6 SYFA_THETH
7 PsiBlast_PDB 69.6843% -56 - C1 -1PYS - SYFA_THET8 -
13 PsiBlast_PDB 69.5343% -56 - C1 -3HFZ 4.4 SYFA_THET8
14 PsiBlast_PDB 68.8343% -55 - C1 -3TEH 3.3 SYFA_THETH
11 PsiBlast_PDB 68.0043% -55 - C1 -1JJC 10.1 SYFA_THET8
19 PsiBlast_PDB 67.7245% -49 - C1 -2ALY 9.7 SYFA_THETH
47 HHSearch 67.2150% -46 - C1 -2AKW 4.4 SYFA_THETH
20 PsiBlast_PDB 65.3845% -47 - C1 -2AMC 3.7 SYFA_THETH
18 PsiBlast_PDB 65.3445% -46 - C1 -2AKW 4.4 SYFA_THETH
10 PsiBlast_PDB 64.8643% -51 - C1 -1B70 4.1 SYFA_THETH
8 PsiBlast_PDB 63.2643% -56 - C1 -1B7Y 8.9 SYFA_THETH
43 HHSearch 61.8647% -46 - C1 -1B7Y 8.9 SYFA_THETH
16 PsiBlast_PDB 61.0553% 5 - C1 -2RHQ 7.2 SYFA_STAHJ
65 Fugue 54.7132% -47 - C1 -3CMQ 7.2 SYFM_HUMAN
27 PsiBlast_CBE 48.2933% -1 - C1 -5MGU 4.6 SYFM_HUMAN
30 PsiBlast_CBE 47.4733% 2 - C1 -3CMQ 7.2 SYFM_HUMAN
51 HHSearch 47.2437% -8 - C1 -5MGW 4.8 SYFM_HUMAN
28 PsiBlast_CBE 47.1133% 1 - C1 -3TEG 3.8 SYFM_HUMAN
29 PsiBlast_CBE 46.0533% 1 - C1 -3HFV 4.5 SYFM_HUMAN
31 PsiBlast_CBE 46.0233% 1 - C1 -5MGW 4.8 SYFM_HUMAN
32 PsiBlast_CBE 45.5332% 1 - C1 -5MGH 4.5 SYFM_HUMAN