@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TY37: (2017-12-13 )
MDAKMNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNATKEQAEKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWIVDSSKLVDKLGKFPLPVEVIPYGSQQLLHIFEEKRFQPVLRTDENGEVLTTDGGHYIIDLHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKGVEILDAIRRK

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5RP_A_5(4M8L)
RPIA_FRATW
[Raw transfer]




5RP_A_5(4M8L)
RPIA_FRATW
[Raw transfer]




A5P_A_4(1UJ6)
RPIA_THET2
[Raw transfer]




5RP_B_22(4M8L)
RPIA_FRATW
[Raw transfer]




DER_C_19(1LK7)
RPIA_PYRHO
[Raw transfer]




A5P_A_4(1UJ6)
RPIA_THET2
[Raw transfer]




DER_B_18(1LK7)
RPIA_PYRHO
[Raw transfer]




DER_A_17(1LK7)
RPIA_PYRHO
[Raw transfer]




5RP_A_2(1UJ5)
RPIA_THET2
[Raw transfer]




CIT_C_3(1M0S)
RPIA_HAEIN
[Raw transfer]




5RP_A_2(1UJ5)
RPIA_THET2
[Raw transfer]




CIT_D_4(1M0S)
RPIA_HAEIN
[Raw transfer]




5RP_B_4(3ENW)
RPIA_VIBVY
[Raw transfer]




DER_B_18(1LK7)
RPIA_PYRHO
[Raw transfer]




R5P_A_2(3UW1)
?
[Raw transfer]




R5P_A_2(3UW1)
?
[Raw transfer]




CIT_D_4(1M0S)
RPIA_HAEIN
[Raw transfer]




DER_D_20(1LK7)
RPIA_PYRHO
[Raw transfer]




5RP_A_3(3HHE)
RPIA_BARHE
[Raw transfer]




5RP_B_6(3HHE)
RPIA_BARHE
[Raw transfer]




5RP_B_6(3HHE)
RPIA_BARHE
[Raw transfer]




5RP_A_3(3ENW)
RPIA_VIBVY
[Raw transfer]




ABF_A_3(1O8B)
RPIA_ECOLI
[Raw transfer]




ABF_A_3(1O8B)
RPIA_ECOLI
[Raw transfer]




3GR_D_13(3KWM)
RPIA_FRATT
[Raw transfer]




EDO_A_7(5UF2)
RPIA_NEIG2
[Raw transfer]




EDO_A_3(3U7J)
?
[Raw transfer]




EDO_A_7(5UF2)
RPIA_NEIG2
[Raw transfer]




PGO_D_19(3IXQ)
RPIA_METJA
[Raw transfer]




ABF_A_3(3ENV)
RPIA_VIBVY
[Raw transfer]




PGO_A_8(3IXQ)
RPIA_METJA
[Raw transfer]




PGO_C_15(3IXQ)
RPIA_METJA
[Raw transfer]




PGO_C_15(3IXQ)
RPIA_METJA
[Raw transfer]




MLT_A_4(4NML)
?
[Raw transfer]




PGO_D_18(3IXQ)
RPIA_METJA
[Raw transfer]




PGO_B_12(3IXQ)
RPIA_METJA
[Raw transfer]




ABF_B_4(3ENV)
RPIA_VIBVY
[Raw transfer]




PEG_C_9(3KWM)
RPIA_FRATT
[Raw transfer]




61 HHSearch 97.1263%-106 - C8 -4GMK - ? -
1 PsiBlast_PDB 96.4463%-103 - C8 -4GMK - ? -
62 HHSearch 95.8063% -98 - C8 -4GMK - ? -
67 HHSearch 80.6640% -86 - C8 -3HHE 3.7 RPIA_BARHE
65 HHSearch 79.5458% - - C8 -3L7O - RPIA_STRMU -
25 PsiBlast_CBE 77.1443% -55 - C8 -3IXQ 3.5 RPIA_METJA
23 PsiBlast_CBE 76.9043% -55 - C8 -3IXQ 3.4 RPIA_METJA
24 PsiBlast_CBE 76.7543% -53 - C8 -3IXQ 2.7 RPIA_METJA
2 PsiBlast_PDB 76.2858% - - C8 -3L7O - RPIA_STRMU -
7 PsiBlast_PDB 76.0243% -53 - C8 -3IXQ 2.0 RPIA_METJA
72 HHSearch 75.9043% -43 - C8 -3IXQ 2.7 RPIA_METJA
64 HHSearch 74.2146% -9 - C8 -1UJ5 4.0 RPIA_THET2
63 HHSearch 73.7046% -10 - C8 -1UJ6 4.0 RPIA_THET2
69 HHSearch 73.3938% -93 - C8 -1LKZ - RPIA_ECOLI -
3 PsiBlast_PDB 72.9847% -10 - C8 -1UJ5 4.0 RPIA_THET2
4 PsiBlast_PDB 72.9246% -10 - C8 -1UJ4 - RPIA_THET2 -
73 HHSearch 72.9136% -77 - C8 -5UF2 2.6 RPIA_NEIG2
6 PsiBlast_PDB 72.3541% -88 - C8 -3HHE 3.1 RPIA_BARHE
22 PsiBlast_CBE 72.2241% -91 - C8 -3HHE 3.7 RPIA_BARHE
5 PsiBlast_PDB 72.0946% -11 - C8 -1UJ6 4.0 RPIA_THET2
77 HHSearch 71.4539% -58 - C8 -1M0S 3.2 RPIA_HAEIN
59 HHSearch 70.1636% -17 - C8 -1LK7 4.1 RPIA_PYRHO
75 HHSearch 69.4936% -80 - C8 -4M8L 3.6 RPIA_FRATW
28 PsiBlast_CBE 67.8439% -11 - C8 -1LK7 4.2 RPIA_PYRHO
26 PsiBlast_CBE 67.2239% -7 - C8 -1LK7 4.2 RPIA_PYRHO
12 PsiBlast_PDB 67.1842% -12 - C8 -3ENW 4.0 RPIA_VIBVY
9 PsiBlast_PDB 66.7339% -3 - C8 -1LK7 4.1 RPIA_PYRHO
16 PsiBlast_PDB 66.6136% -0 - C8 -5UF2 2.6 RPIA_NEIG2
27 PsiBlast_CBE 65.5439% -10 - C8 -1LK7 4.0 RPIA_PYRHO
11 PsiBlast_PDB 65.5442% -13 - C8 -3ENV 2.0 RPIA_VIBVY
34 PsiBlast_CBE 65.0238% 8 - C8 -1M0S 3.2 RPIA_HAEIN
60 HHSearch 64.8136% 28 - C8 -3UW1 4.7 ?
33 PsiBlast_CBE 64.8042% -12 - C8 -3ENV 2.9 RPIA_VIBVY
32 PsiBlast_CBE 64.6042% -9 - C8 -3ENW 3.1 RPIA_VIBVY
17 PsiBlast_PDB 62.8238% 11 - C8 -1M0S 3.0 RPIA_HAEIN
20 PsiBlast_PDB 62.4637% 29 - C8 -3UW1 4.7 ?
19 PsiBlast_PDB 62.2737% 31 - C8 -3U7J 2.7 ?
68 HHSearch 59.8838% -90 - C8 -1O8B 4.4 RPIA_ECOLI
15 PsiBlast_PDB 58.7238% -89 - C8 -1O8B 4.5 RPIA_ECOLI
46 PsiBlast_CBE 52.7338% 16 - C8 -3KWM 2.4 RPIA_FRATT
43 PsiBlast_CBE 52.2238% 16 - C8 -4M8L 3.6 RPIA_FRATW
47 PsiBlast_CBE 52.1638% 13 - C8 -3KWM 2.6 RPIA_FRATT
42 PsiBlast_CBE 51.8438% 15 - C8 -4M8L 4.0 RPIA_FRATW