@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TY41: (2017-12-13 )
MGMWCTLCTSYTYQTNKKYIVFLGGHFKMAKEKFDRSKPHVNIGTIGHVDHGKTTLTAAITTVLSKKNGGQAMAYDQIDGAPEERERGITISTAHVEYETDTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKVDMVDDEELLELVEMEVRDLLTEYEFPGDDVPVVAGSALKALEGDASYEEKILELMAAVDEYIPTPERDNDKPFMMPVEDVFSITGRGTVATGRVERGQVRVGDEVEVVGIAEETSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIQRGQVLAKPGTITPHTKFSAEVYVLTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVELPEGTEMVMPGDNVTMEVELIHPIAIENGTKFSIREGGRTVGAGVVTEIKA

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_H_6(1DG1)
EFTU2_ECOLI
[Raw transfer]




GDP_B_6(1EFC)
EFTU1_ECOLI
[Raw transfer]




GDP_A_3(1HA3)
EFTU1_THET8
[Raw transfer]




GNP_A_2(4LBW)
EFTU1_THETH
[Raw transfer]




GTP_A_3(3VMF)
EF1A_AERPE
[Raw transfer]




PPV_B_9(2PMD)
IF2G_SULSO
[Raw transfer]




GNP_A_2(4LBV)
EFTU1_THETH
[Raw transfer]




GDP_A_6(1D8T)
EFTU1_ECOLI
[Raw transfer]




GDP_A_3(5JBQ)
?
[Raw transfer]




GDP_A_5(1EFC)
EFTU1_ECOLI
[Raw transfer]




GNP_A_2(4H9G)
EFTU1_THETH
[Raw transfer]




GNP_A_3(2C77)
EFTU2_THET8
[Raw transfer]




GDP_G_5(1DG1)
EFTU2_ECOLI
[Raw transfer]




GDP_B_7(1HA3)
EFTU1_THET8
[Raw transfer]




GNP_A_2(2C78)
EFTU1_THET8
[Raw transfer]




GNP_A_2(2C78)
EFTU1_THET8
[Raw transfer]




GNP_A_3(1EXM)
EFTU1_THETH
[Raw transfer]




GNP_A_2(4LBZ)
EFTU1_THETH
[Raw transfer]




GDP_B_(1D8T)
EFTU1_ECOLI
[Raw transfer]




GNP_P_9(1B23)
EFTU_THEAQ
[Raw transfer]




GDP_A_3(3U2Q)
?
[Raw transfer]




GNP_A_3(2BVN)
EFTU2_ECOLI
[Raw transfer]




GNP_B_6(2BVN)
EFTU2_ECOLI
[Raw transfer]




GDP_A_4(4P3Y)
?
[Raw transfer]




GDP_K_10(4IW3)
EFTU1_PSEPK
[Raw transfer]




GNP_B_7(4PC6)
?
[Raw transfer]




GDP_A_5(3U6K)
EFTU1_ECOLI
[Raw transfer]




GNP_A_2(4LC0)
EFTU1_THETH
[Raw transfer]




GNP_A_5(4PC6)
?
[Raw transfer]




GDP_A_4(4G5G)
EFTU1_ECOLI
[Raw transfer]




GNP_A_5(1OB2)
EFTU2_ECOLI
[Raw transfer]




GNP_A_3(1EFT)
EFTU_THEAQ
[Raw transfer]




GDP_B_8(1TUI)
EFTU_THEAQ
[Raw transfer]




GNP_A_2(4LBY)
EFTU1_THETH
[Raw transfer]




GDP_A_3(2FX3)
EFTU1_ECOLI
[Raw transfer]




GDP_C_9(1TUI)
EFTU_THEAQ
[Raw transfer]




GDP_B_7(3U6K)
?
[Raw transfer]




GDP_A_7(1TUI)
EFTU_THEAQ
[Raw transfer]




GNP_A_4(1KK1)
IF2G_PYRAB
[Raw transfer]




GDP_A_5(4ZV4)
EFTU_PSEAE
[Raw transfer]




GDP_A_3(1ETU)
EFTU1_ECOLI
[Raw transfer]




GDP_B_7(4IW3)
EFTU1_PSEPK
[Raw transfer]




GCP_A_26(4M53)
IF2G_SULSO
[Raw transfer]




GDP_A_3(2PMD)
IF2G_SULSO
[Raw transfer]




GNP_A_3(4PC7)
EFTU1_ECOLI
[Raw transfer]




GDP_B_7(4ZV4)
EFTU_PSEAE
[Raw transfer]




GCP_B_6(3I1F)
IF2G_SULSO
[Raw transfer]




GNP_A_4(3QSY)
IF2G_SULSO
[Raw transfer]




GDP_G_10(5I4R)
?
[Raw transfer]




GDP_C_9(5I4R)
?
[Raw transfer]




FMT_A_24(4M53)
IF2G_SULSO
[Raw transfer]




FMT_A_12(4RJL)
IF2G_SULSO
[Raw transfer]




GDP_A_3(1EFM)
EFTU2_ECOLI
[Raw transfer]




TAC_B_8(2HCJ)
EFTU1_ECOUT
[Raw transfer]




TAC_B_8(2HCJ)
EFTU1_ECOUT
[Raw transfer]




46 PsiBlast_CBE 93.2077% -93 - C2 -1D8T 8.7 EFTU1_ECOLI
45 PsiBlast_CBE 92.6077%-101 - C2 -1D8T 8.9 EFTU1_ECOLI
24 PsiBlast_CBE 92.4277%-108 - C2 -4PC3 - EFTU1_ECOLI -
9 PsiBlast_PDB 92.1377%-107 - C2 -4PC6 5.9 ?
3 PsiBlast_PDB 92.0977% -93 - C2 -4G5G 8.5 EFTU1_ECOLI
11 PsiBlast_PDB 92.0577% -96 - C2 -5JBQ 9.2 ?
4 PsiBlast_PDB 91.9377% -99 - C2 -1DG1 8.2 EFTU2_ECOLI
7 PsiBlast_PDB 91.7477%-110 - C2 -4PC2 - ? -
1 PsiBlast_PDB 91.6177% -97 - C2 -3U6K 7.3 EFTU1_ECOLI
40 PsiBlast_CBE 91.5177% -98 - C2 -1EFC 8.8 EFTU1_ECOLI
8 PsiBlast_PDB 91.4477%-111 - C2 -4PC3 - EFTU1_ECOLI -
22 PsiBlast_CBE 90.8677% -94 - C2 -1DG1 7.3 EFTU2_ECOLI
25 PsiBlast_CBE 90.6577%-105 - C2 -4PC2 - ? -
38 PsiBlast_CBE 90.4477% -94 - C2 -2BVN 8.6 EFTU2_ECOLI
21 PsiBlast_CBE 90.3877% -94 - C2 -3U6K 5.8 ?
23 PsiBlast_CBE 90.3677%-104 - C2 -4PC6 6.9 ?
6 PsiBlast_PDB 90.1977%-110 - C2 -4PC1 - ? -
5 PsiBlast_PDB 89.9577%-100 - C2 -4P3Y 9.4 ?
2 PsiBlast_PDB 89.8977% -99 - C2 -3U2Q 7.1 ?
37 PsiBlast_CBE 89.8177% -96 - C2 -2BVN 9.1 EFTU2_ECOLI
43 PsiBlast_CBE 89.7877% -92 - C2 -2FX3 7.2 EFTU1_ECOLI
39 PsiBlast_CBE 89.5477% -92 - C2 -1EFC 8.4 EFTU1_ECOLI
17 PsiBlast_PDB 88.7377% -90 - C2 -1OB2 7.0 EFTU2_ECOLI
60 PsiBlast_CBE 84.6477%-116 - C2 -5I4R 3.4 ?
10 PsiBlast_PDB 84.3477%-101 - C2 -4PC7 7.7 EFTU1_ECOLI
61 PsiBlast_CBE 84.3077%-114 - C2 -5I4R 3.5 ?
128 HHSearch 84.0577%-108 - C2 -2HCJ 3.6 EFTU1_ECOUT
68 PsiBlast_CBE 83.7676%-108 - C2 -2HCJ 3.6 EFTU1_ECOUT
59 PsiBlast_CBE 81.4872% -34 - C2 -4IW3 6.5 EFTU1_PSEPK
53 PsiBlast_CBE 81.0874% -27 - C2 -4ZV4 6.9 EFTU_PSEAE
52 PsiBlast_CBE 80.8674% -29 - C2 -4ZV4 4.7 EFTU_PSEAE
58 PsiBlast_CBE 80.7072% -31 - C2 -4IW3 7.6 EFTU1_PSEPK
19 PsiBlast_PDB 80.6974% 18 - C2 -1EXM 9.5 EFTU1_THETH
35 PsiBlast_CBE 80.1974% 22 - C2 -4H9G 9.7 EFTU1_THETH
47 PsiBlast_CBE 79.7874% 21 - C2 -4LC0 9.7 EFTU1_THETH
18 PsiBlast_PDB 79.6274% 24 - C2 -1EFT 9.3 EFTU_THEAQ
48 PsiBlast_CBE 79.5274% 21 - C2 -4LBZ 9.5 EFTU1_THETH
51 PsiBlast_CBE 79.5074% 19 - C2 -4LBV 9.6 EFTU1_THETH
117 HHSearch 79.2876% 17 - C2 -2C78 9.4 EFTU1_THET8
14 PsiBlast_PDB 79.1774% 16 - C2 -1B23 8.5 EFTU_THEAQ
49 PsiBlast_CBE 79.1174% 19 - C2 -4LBY 9.4 EFTU1_THETH
33 PsiBlast_CBE 79.0674% -23 - C2 -1HA3 8.3 EFTU1_THET8
50 PsiBlast_CBE 78.9774% 20 - C2 -4LBW 9.6 EFTU1_THETH
36 PsiBlast_CBE 78.4674% 16 - C2 -2C78 9.4 EFTU1_THET8
34 PsiBlast_CBE 77.6574% 19 - C2 -2C77 9.8 EFTU2_THET8
27 PsiBlast_CBE 76.6374% 10 - C2 -1TUI 6.1 EFTU_THEAQ
13 PsiBlast_PDB 76.2774% 9 - C2 -1TUI 6.6 EFTU_THEAQ
28 PsiBlast_CBE 76.0274% 8 - C2 -1TUI 6.6 EFTU_THEAQ
20 PsiBlast_PDB 74.7974% 17 - C2 -1HA3 9.1 EFTU1_THET8
44 PsiBlast_CBE 64.8877%-134 - C2 -1ETU 4.5 EFTU1_ECOLI
141 HHSearch 56.1532% 22 - C2 -1KK1 8.0 IF2G_PYRAB
104 PsiBlast_CBE 40.9732% -27 - C2 -2PMD Error IF2G_SULSO
105 PsiBlast_CBE 38.3832% -27 - C2 -2PMD 5.3 IF2G_SULSO
101 PsiBlast_CBE 36.9732% -37 - C2 -3I1F 2.7 IF2G_SULSO
88 PsiBlast_CBE 32.7533% 12 - C2 -4M53 8.6 IF2G_SULSO
100 PsiBlast_CBE 32.0732% -15 - C2 -3QSY 5.1 IF2G_SULSO
54 PsiBlast_CBE 31.6875% - - C2 -1EFM 2.4 EFTU2_ECOLI