@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TY87: (2017-12-14 )
MWKMDNQLTKELKENYNIVFHDLNLLEQAFTHSSYVNEHRNLQLSDNERLEFLGDAVLELMVSQYLFRLYPHLPEGKLTKTRAAIVREDSLSKFAKECHFDQYVLLGKGEENSGGRTRPALLCDLFEAFLGALYLDQGFDTTHAFIEKVIFPKVKAGAFSHEMDHKTKLQEVLQKSGDVSIEYRLINEEGPAHERVFWIEVYVDDQLIGTGQGKSKKLAEQAAAENALAAL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_H_4(1YYW)
RNC_AQUAE
[Raw transfer]

-

NACID_F_4(1YYK)
RNC_AQUAE
[Raw transfer]

-

NACID_F_4(1YYO)
RNC_AQUAE
[Raw transfer]

-

NACID_F_4(1YZ9)
RNC_AQUAE
[Raw transfer]

-

NACID_C_3(1RC7)
RNC_AQUAE
[Raw transfer]

-

NACID_C_3(1RC7)
RNC_AQUAE
[Raw transfer]

-

NACID_L_8(1YYW)
RNC_AQUAE
[Raw transfer]

-

51 HHSearch 80.9638% 5 - C2 -1O0W - RNC_THEMA -
1 PsiBlast_PDB 79.4337% -0 - C2 -1O0W - RNC_THEMA -
55 HHSearch 73.8738% -77 - C2 -2A11 - RNC_MYCTU -
53 HHSearch 73.7933% -50 - C2 -2NUG - RNC_AQUAE -
54 HHSearch 73.2133% -43 - C2 -1RC7 3.8 RNC_AQUAE
5 PsiBlast_PDB 71.3041%-132 - C2 -3O2R - RNC_CAMJE -
22 PsiBlast_CBE 70.8533% 7 - C2 -4M30 - RNC_AQUAE -
63 HHSearch 70.7138%-137 - C2 -3O2R - RNC_CAMJE -
24 PsiBlast_CBE 70.2733% 2 - C2 -2NUG - RNC_AQUAE -
6 PsiBlast_PDB 69.6233% 2 - C2 -1YYK 3.9 RNC_AQUAE
27 PsiBlast_CBE 69.3833% 0 * C2 *1YYK - RNC_AQUAE -
2 PsiBlast_PDB 69.3637%-144 - C- -3N3W - RNC_CAMJE -
12 PsiBlast_PDB 69.2133% 6 - C2 -4M30 - RNC_AQUAE -
23 PsiBlast_CBE 68.4633% 4 - C2 -4M2Z - RNC_AQUAE -
11 PsiBlast_PDB 68.3933% 5 - C2 -4M2Z - RNC_AQUAE -
10 PsiBlast_PDB 68.3033% 5 - C2 -2NUG - RNC_AQUAE -
16 PsiBlast_PDB 68.2133% 10 - C2 -2EZ6 - RNC_AQUAE -
14 PsiBlast_PDB 68.1133% 6 - C2 -1RC7 3.8 RNC_AQUAE
13 PsiBlast_PDB 67.8033% 11 - C2 -1YZ9 4.1 RNC_AQUAE
9 PsiBlast_PDB 67.7233% 17 - C2 -2NUF - RNC_AQUAE -
15 PsiBlast_PDB 67.5133% 5 - C2 -1YYO 4.2 RNC_AQUAE
26 PsiBlast_CBE 63.3833% 14 - C2 -1YYW 3.0 RNC_AQUAE
7 PsiBlast_PDB 63.3133% 19 - C2 -1YYW 3.1 RNC_AQUAE