@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TYI5: (2017-12-14 )
MSDDMLTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGEMEDKHFHEIIEELQPGDALVMNNTRVLPARLYGEKPDTGAHLEVLLLTNTQGDTWETLIKPAKRAKVGTRISFGDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESLGEMPLPPYIKERLEDPDRYQTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHMHSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITPGYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGDAMFVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_A_3(1VKY)
QUEA_THEMA
[Raw transfer]




UNL_A_3(1VKY)
QUEA_THEMA
[Raw transfer]




UNL_A_3(1VKY)
QUEA_THEMA
[Raw transfer]




UNL_B_4(1VKY)
QUEA_THEMA
[Raw transfer]




UNL_B_4(1VKY)
QUEA_THEMA
[Raw transfer]




CIT_B_2(1WDI)
QUEA_THET2
[Raw transfer]




CIT_B_2(1WDI)
QUEA_THET2
[Raw transfer]




1 PsiBlast_PDB 87.4666%-110 - C5 -1YY3 - QUEA_BACSU -
31 HHSearch 84.9365% -84 - C5 -1YY3 - QUEA_BACSU -
19 PsiBlast_CBE 81.4851%-137 - C5 -1VKY 4.1 QUEA_THEMA
2 PsiBlast_PDB 81.2951%-142 - C5 -1VKY 4.1 QUEA_THEMA
32 HHSearch 81.0251%-137 - C5 -1VKY 4.1 QUEA_THEMA
33 HHSearch 80.2151%-142 * C5 *1VKY 4.1 QUEA_THEMA
21 Fugue 80.0948%-138 - C5 -1VKY 4.1 QUEA_THEMA
34 HHSearch 69.2349% -11 - C5 -1WDI 4.5 QUEA_THET2
3 PsiBlast_PDB 67.8248% -11 - C5 -1WDI 4.5 QUEA_THET2
30 Fugue 37.2312% -65 * C6 *1F6Y - ACSE_MOOTH -
50 HHSearch 36.9114%-160 - C5 -3PVJ - ? -
49 HHSearch 34.4514%-157 - C5 -3V17 - ? -
37 HHSearch 33.4636%-196 - C5 -1NX8 - CARC_PECCC -
47 HHSearch 33.1727%-211 - C5 -2WBQ - ARGHX_STRVI -
28 Fugue 32.6918% 40 - C6 -4IMP - ? -
48 HHSearch 32.1627%-196 - C5 -2WBO - ARGHX_STRVI -
7 PsiBlast_PDB 31.4138%-124 - C7 -2FZP - RNF41_HUMAN -
41 HHSearch 31.3622%-209 - C5 -2OG6 - ASNO_STRCO -
36 HHSearch 30.6530%-203 - C5 -4M23 - ? -
6 PsiBlast_PDB 30.3538% -89 - C7 -2GWF - RNF41_HUMAN -