@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TZ12: (2017-12-15 )
MIKQKIETSIYRRKIMEQKWWHHSVVYQIYPRSFQDSNQDGIGDLRGIISRLDYLAYLGIDAIWLSPVYESPNDDNGYDISNYQAIMAEFGTMEEMEELIEEAKKRNIRIIMDLVVNHTSDEHPWFIEARKNKENPYRDYYIWRDPVNGKEPNRLRSIFSGSAWQLDEKTGQYFLHLYSKRQPDLNWKNKQVRQEIYQMMNFWIDKGIGGFRMDVIDMIGKEPDKEITSNGPKLHEYLQEMNQATFGDKNLMTVGETWGATTEIAKLYSNPKRNELSMVFQFEHIGLDQQEGKDKWDLKPLSISELKKVLSKWQTSLGDEGWNSLFWNNHDLPRIVSRWGNDDVYRKESAKMFAILLHMMKGTPYIYQGEELGMTNCPIDDIAEAKDIETINMYNERISSGFTKEEILESIKAKGRDNARTPMQWNAREHAGFTTGIPWLRVNPNYKEINAEEALADQDSVFYMYKKLIDLRRKHDIIVWGDYELVEKTPEHVFAYSRIYEDQQWLVICNMSSEKQTFTIPREALRVIVSNYPLKQLPDGKVDLRPYEAFVLEVK

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUC_A_4(4H8U)
?
[Raw transfer]




SUC_B_4(2PWE)
?
[Raw transfer]




GLC_A_4(4H7V)
?
[Raw transfer]




TEU_B_6(4H8V)
?
[Raw transfer]




GLC_B_6(4H7V)
?
[Raw transfer]




ISL_A_4(4HA1)
?
[Raw transfer]




GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]




GLC_A_2(3AXI)
MALX3_YEAST
[Raw transfer]




GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]




TEU_B_6(4H8U)
?
[Raw transfer]




SUGAR_A_2(2ZID)
DEXB_STRMU
[Raw transfer]

-

CTS_B_6(2PWG)
?
[Raw transfer]




NOJ_B_6(2PWD)
?
[Raw transfer]




NOJ_A_11(3GBE)
?
[Raw transfer]




GLC_A_4(4HP5)
?
[Raw transfer]




GLC_A_4(4HOZ)
?
[Raw transfer]




NOJ_A_5(2PWD)
?
[Raw transfer]




CTS_A_5(2PWG)
?
[Raw transfer]




GLC_A_2(3AXH)
MALX3_YEAST
[Raw transfer]




GOL_A_5(4AIE)
?
[Raw transfer]




GLC_B_6(4HA1)
?
[Raw transfer]




GOL_A_5(4GI8)
?
[Raw transfer]




GOL_B_10(4GI6)
?
[Raw transfer]




GOL_B_15(4GI8)
?
[Raw transfer]




GOL_B_8(4GI9)
?
[Raw transfer]




BGC_A_2(4WLC)
DEXB_STRMU
[Raw transfer]




GOL_B_12(4GIA)
?
[Raw transfer]




GOL_A_5(4AIE)
?
[Raw transfer]




GOL_A_5(4GIA)
?
[Raw transfer]




GOL_A_6(2ZIC)
DEXB_STRMU
[Raw transfer]




GOL_A_5(4GI9)
?
[Raw transfer]




GOL_A_5(4GI6)
?
[Raw transfer]




TRS_B_6(1ZJB)
?
[Raw transfer]




GLO_B_7(4M56)
O16G1_BACSU
[Raw transfer]




TRS_B_6(4GO8)
?
[Raw transfer]




TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]




GOL_A_3(4HOW)
?
[Raw transfer]




GOL_A_3(4H2C)
?
[Raw transfer]




TRS_B_6(1ZJA)
?
[Raw transfer]




GOL_A_3(4GIN)
?
[Raw transfer]




TRS_A_5(1ZJB)
?
[Raw transfer]




TRS_A_4(4GO8)
?
[Raw transfer]




TRS_A_5(2ZIC)
DEXB_STRMU
[Raw transfer]




TRS_B_6(4GO9)
?
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




TRS_A_4(4GO9)
?
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4MAZ)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4HOX)
?
[Raw transfer]




EDO_A_4(3GBD)
?
[Raw transfer]




EDO_A_2(3GBD)
?
[Raw transfer]




95 HHSearch 88.0464% -31 - C1 -4AIE 2.3 ?
1 PsiBlast_PDB 87.0363% -32 - C1 -4AIE 2.3 ?
2 PsiBlast_PDB 81.2658% -2 - C1 -1UOK - O16G_BACCE -
4 PsiBlast_PDB 81.2257% -14 - C1 -2ZID 5.7 DEXB_STRMU
99 HHSearch 81.2060% -3 - C1 -1UOK - O16G_BACCE -
101 HHSearch 80.2958% -14 - C1 -4XB3 - DEXB_STRMU -
6 PsiBlast_PDB 80.1957% -13 - C1 -4XB3 - DEXB_STRMU -
3 PsiBlast_PDB 80.1857% -13 - C1 -2ZIC 3.4 DEXB_STRMU
11 PsiBlast_PDB 79.8050% 2 - C1 -5BRQ - ? -
5 PsiBlast_PDB 79.5557% -12 - C1 -4WLC 4.6 DEXB_STRMU
28 PsiBlast_CBE 79.1850% 6 - C1 -5BRP - ? -
12 PsiBlast_PDB 78.1050% 5 - C1 -5BRP - ? -
29 PsiBlast_CBE 77.6550% 5 - C1 -5BRP - ? -
94 HHSearch 76.7951% 8 - C1 -5BRP - ? -
21 PsiBlast_CBE 76.1254% 14 - C1 -5DO8 - ? -
97 HHSearch 75.9551% 5 - C1 -5BRQ - ? -
7 PsiBlast_PDB 75.6754% 14 - C1 -5DO8 - ? -
96 HHSearch 75.2556% 14 - C1 -5DO8 - ? -
22 PsiBlast_CBE 75.0254% 15 - C1 -5DO8 - ? -
106 HHSearch 74.3653% 28 - C1 -4M8U 4.1 O16G1_BACSU
8 PsiBlast_PDB 73.6151% 27 - C1 -4MB1 4.0 O16G1_BACSU
10 PsiBlast_PDB 73.3450% 29 - C1 -4M8U 4.1 O16G1_BACSU
98 HHSearch 73.2753% 27 - C1 -4MB1 4.0 O16G1_BACSU
17 PsiBlast_PDB 72.7342% 13 - C1 -4HP5 4.8 ?
9 PsiBlast_PDB 72.7050% 31 - C1 -4MAZ 3.7 O16G1_BACSU
104 HHSearch 72.3843% 9 - C1 -1ZJA 3.8 ?
23 PsiBlast_CBE 72.1651% 18 - C1 -4M56 2.8 O16G1_BACSU
18 PsiBlast_PDB 71.6142% 13 - C1 -4HOZ 3.9 ?
15 PsiBlast_PDB 71.5542% 16 - C1 -4HOX 4.2 ?
48 PsiBlast_CBE 71.4044% 6 - C1 -4GI8 3.0 ?
14 PsiBlast_PDB 71.1342% 15 - C1 -4HOW 4.2 ?
19 PsiBlast_PDB 71.0944% 2 - C1 -4GIN 2.9 ?
32 PsiBlast_CBE 70.9844% 6 - C1 -2PWG 3.2 ?
40 PsiBlast_CBE 70.8444% 5 - C1 -1ZJA 4.0 ?
20 PsiBlast_PDB 70.7444% 3 - C1 -4H2C 3.9 ?
46 PsiBlast_CBE 70.6344% 7 - C1 -4GI9 2.9 ?
38 PsiBlast_CBE 70.6044% 6 - C1 -1ZJB 4.0 ?
45 PsiBlast_CBE 70.3544% 7 - C1 -4GIA 3.1 ?
51 PsiBlast_CBE 70.2644% 6 - C1 -4GI6 2.6 ?
68 PsiBlast_CBE 70.1041% 19 * C1 *3GBE 3.5 ?
44 PsiBlast_CBE 70.0844% 5 - C1 -4GIA 2.9 ?
66 PsiBlast_CBE 69.8843% 4 - C1 -4H7V 4.3 ?
67 PsiBlast_CBE 69.8243% 5 - C1 -4H7V 4.5 ?
36 PsiBlast_CBE 69.8244% 6 - C1 -2PWD 5.1 ?
39 PsiBlast_CBE 69.7144% 5 - C1 -1ZJB 4.0 ?
69 PsiBlast_CBE 69.6241% 18 - C1 -3GBD 3.8 ?
49 PsiBlast_CBE 69.4744% 7 - C1 -4GI8 4.2 ?
47 PsiBlast_CBE 69.4744% 5 - C1 -4GI9 2.6 ?
50 PsiBlast_CBE 69.3844% 8 - C1 -4GI6 2.8 ?
41 PsiBlast_CBE 69.1344% 8 - C1 -1ZJA 3.8 ?
55 PsiBlast_CBE 69.0643% 7 - C1 -4GO9 4.4 ?
33 PsiBlast_CBE 69.0444% 8 - C1 -2PWG 2.8 ?
54 PsiBlast_CBE 68.8843% 6 - C1 -4GO9 3.0 ?
62 PsiBlast_CBE 68.8643% 4 - C1 -4HA1 4.3 ?
37 PsiBlast_CBE 68.8644% 8 - C1 -2PWD 5.0 ?
52 PsiBlast_CBE 68.2943% 8 - C1 -4GO8 4.2 ?
53 PsiBlast_CBE 68.2043% 9 - C1 -4GO8 4.1 ?
102 HHSearch 66.4239% 19 - C1 -3A4A 4.9 MALX3_YEAST
73 PsiBlast_CBE 63.1538% 28 - C1 -3AXI 4.6 MALX3_YEAST
71 PsiBlast_CBE 62.9138% 27 - C1 -3A4A 4.9 MALX3_YEAST
74 PsiBlast_CBE 62.4938% 28 - C1 -3AXH 4.8 MALX3_YEAST