@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TZ89: (2017-12-16 )
MNMVKKKITIKEVAKLSGVSITTVSLILNGNTEKFSPKTVQKVLAAKEELGYQPDYFARQMITKETKTIGVLVPDITNPFFSTLMRGIEDILYKQNFVTILCNADSDHQKEIEYLAELTRRGVDGFIIATSAVSTDAINENLKKQGRPFIVLDQKKSEGFSDAVRTDDFRGGYLAGMHLLSLGHQTIALVYPENPPENVHARIEGFKSALDVYQIPHDQLILLPTQFSKQGGYQITAELLDSAATGVFALNDELAFGLYRGLEEAGKSIPEDYSIIGYDNIDMCEYIKPKLTTIAQPIFELGQTSAKLLLDRIQFPEKEWEEKRLPVRLEKRFSTAPLK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RIB_D_8(4RK0)
?
[Raw transfer]



RIB_A_5(4RK0)
?
[Raw transfer]



RIB_B_6(4RK0)
?
[Raw transfer]



RIB_C_7(4RK0)
?
[Raw transfer]
1 PsiBlast_PDB 86.4098% -96 - C1 -4RK1 - ? -
2 PsiBlast_PDB 74.4561% -97 - C1 -4RK0 2.9 ?
21 PsiBlast_CBE 74.0161% -98 - C1 -4RK0 3.9 ?
23 PsiBlast_CBE 73.9961%-106 - C1 -4RK0 3.5 ?
22 PsiBlast_CBE 73.1961% -99 - C1 -4RK0 3.6 ?
114 HHSearch 65.2133% -34 - C1 -1JFT - PURR_ECOLI -
36 PsiBlast_CBE 65.1332% -39 - C1 -1PNR - PURR_ECOLI -
111 HHSearch 64.8833% -56 - C1 -1RZR - CCPA_BACME -
8 PsiBlast_PDB 64.6033% -59 - C1 -1RZR - CCPA_BACME -
10 PsiBlast_PDB 64.5532% -43 - C1 -1BDH - PURR_ECOLI -
11 PsiBlast_PDB 64.3432% -41 - C1 -1QP7 - PURR_ECOLI -
33 PsiBlast_CBE 64.1332% -40 - C1 -1QPZ - PURR_ECOLI -
32 PsiBlast_CBE 64.0132% -43 - C1 -1WET - PURR_ECOLI -
14 PsiBlast_PDB 63.8932% -40 - C1 -1JH9 - PURR_ECOLI -
30 PsiBlast_CBE 63.8432% -40 - C1 -1JFT - PURR_ECOLI -
34 PsiBlast_CBE 63.8032% -41 - C1 -1QP4 - PURR_ECOLI -
38 PsiBlast_CBE 63.7832% -40 - C1 -1JFS - PURR_ECOLI -
35 PsiBlast_CBE 63.7832% -38 - C1 -1QP0 - PURR_ECOLI -
31 PsiBlast_CBE 63.7532% -39 - C1 -1ZAY - PURR_ECOLI -
29 PsiBlast_CBE 63.5932% -44 - C1 -2PUD - PURR_ECOLI -