@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TZI8: (2017-12-16 )
MPSNNLEGMNEVKTIYLDHAATTPMHPQVIEAMTAIMQDTFGNPSSIHGFGRHAHEKLETARQIIADSLQAKPHEIIFNSGGTEGDNTAILETAFSRQKEGRHLITTAIEHPAVLNTMKYLETKGFDVTYLPVDEKGNLSIEEVKKALREDTILVSVMYGNNEIGNLMPIKEIGELLADHPAYFHTDAVQAYGNQTIHPEELGIDLLSISAHKINGPKGVGFLYKRDGVNIPALLLGGEQEEKRRAGTENLAGIWGMAKAVELLSPEEREARNNKYKGFQQLILDTLEANEIPYQVNGDLTNKLPHVLNLRLIGEANDLLLMKLDLNGVAISTGSACTAGNIEPSHVLEAMYGEDTPILKESIRISFGLGNTEDDIQYFLDQLVRAVKK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_A_5(4R5F)
ISCS2_ARCFU
[Raw transfer]



PLP_D_4(1ECX)
?
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_D_4(1ECX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_B_4(3VAX)
?
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_B_6(3LVJ)
ISCS_ECO57
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



CYS_F_6(1ECX)
?
[Raw transfer]



PLP_A_3(3LVK)
ISCS_ECO57
[Raw transfer]



ALA_A_4(5B87)
?
[Raw transfer]



GOL_B_7(4LW2)
CSDA_ECOLI
[Raw transfer]



GOL_B_13(5FT6)
CSDA_ECOLI
[Raw transfer]



SLP_B_8(3A9Z)
SCLY_RAT
[Raw transfer]



CYS_E_5(1ECX)
?
[Raw transfer]



SLP_A_4(3A9Z)
SCLY_RAT
[Raw transfer]



ALA_A_3(5J8Q)
SUFS_BACSU
[Raw transfer]



CYS_B_4(3A9Y)
SCLY_RAT
[Raw transfer]



CSS_F_6(1ELU)
?
[Raw transfer]
4 PsiBlast_PDB 94.1839% 0 - C- -5KZ5 - NFS1_HUMAN -
96 HHSearch 93.7940% 0 - C- -5KZ5 - NFS1_HUMAN -
75 HHSearch 80.7235% -71 - C2 -4EB5 - ISCS2_ARCFU -
76 HHSearch 80.1135% -75 - C2 -4HVK - ISCS2_ARCFU -
23 PsiBlast_CBE 78.8439% -45 - C2 -5USR - ? -
66 Fugue 77.9539% 9 - C2 -4ISY - ISCSL_MYCTU -
7 PsiBlast_PDB 77.8736% -64 - C2 -4EB5 - ISCS2_ARCFU -
9 PsiBlast_PDB 77.3036% -68 - C2 -4HVK - ISCS2_ARCFU -
26 PsiBlast_CBE 76.9236% -74 - C2 -4EB5 - ISCS2_ARCFU -
78 HHSearch 76.6339% -23 * C2 *1EG5 3.6 ?
25 PsiBlast_CBE 76.1836% -72 - C2 -4EB7 - ISCS2_ARCFU -
5 PsiBlast_PDB 75.9836% -69 - C2 -4R5F 4.2 ISCS2_ARCFU
8 PsiBlast_PDB 75.9236% -65 - C2 -4EB7 - ISCS2_ARCFU -
79 HHSearch 75.5240% 7 - C2 -4ISY - ISCSL_MYCTU -
1 PsiBlast_PDB 75.0741% 28 - C2 -3LVJ - ISCS_ECO57 -
77 HHSearch 74.9739% -22 - C2 -1ECX 3.9 ?
21 PsiBlast_CBE 74.9341% 27 - C2 -3LVJ 3.9 ISCS_ECO57
64 Fugue 74.6638% -24 - C2 -1ECX 3.7 ?
2 PsiBlast_PDB 73.4941% 27 - C2 -3LVK 3.5 ISCS_ECO57
14 PsiBlast_PDB 72.7732% 0 - C2 -3A9Z 3.6 SCLY_RAT
11 PsiBlast_PDB 72.5139% -26 - C2 -1EG5 3.6 ?
32 PsiBlast_CBE 71.2432% 14 - C2 -3A9Y 3.0 SCLY_RAT
24 PsiBlast_CBE 69.9940% -25 - C2 -1ECX 3.9 ?
6 PsiBlast_PDB 69.9740% -28 - C2 -1ECX 3.9 ?
31 PsiBlast_CBE 68.1332% 18 - C2 -3A9Z 3.7 SCLY_RAT
30 PsiBlast_CBE 66.0739% 3 - C2 -3VAX 3.8 ?
12 PsiBlast_PDB 65.4239% 2 - C2 -3VAX 3.8 ?
74 HHSearch 63.1237% 10 - C2 -3VAX 3.8 ?