@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TZK7: (2017-12-16 )
MNGMSLIQLTNVKKTFNGKNGNIQAVNDVSLNVEKGDIYGIVGYSGAGKSTLVRLLNGLELPTSGEVIVNDQDITKLKNKELRTFRKKIGMIFQHFNLLWSRTVLENIQLPLELAGVPKSKRKERAEELLRLVGLEGRGQAYPSQLSGGQKQRVGIARALANDPEILLCDEATSALDPQTTEEVLDLLLAINKKLNLTIVLITHEMNVIRKICNKVAVMELGKVVEEGDVLTVFRQPKKEVTKRFVQQDIEPEADSTELLAELIKEHPSGRLATFDL

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




3 PsiBlast_PDB 95.8853%-138 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 94.4053%-143 - C1 -3TUI - METN_ECOLI -
22 PsiBlast_CBE 93.8153%-135 - C1 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 93.3353%-133 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 92.8753%-131 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 92.1253%-135 - C1 -3TUI - METN_ECOLI -
21 PsiBlast_CBE 92.0653%-140 - C1 -3TUZ - METN_ECOLI -
23 PsiBlast_CBE 91.9753%-134 - C1 -3TUZ - METN_ECOLI -
4 PsiBlast_PDB 90.2853%-147 - C1 -3TUJ - METN_ECOLI -
143 Fugue 88.9250%-138 - C1 -3TUZ - METN_ECOLI -
131 HHSearch 85.5756%-137 - C1 -3TUI - METN_ECOLI -
1 PsiBlast_PDB 83.9554%-131 - C1 -3DHW - METN_ECOLI -
125 HHSearch 77.1857%-140 - C1 -3DHW - METN_ECOLI -
144 Fugue 68.1830%-107 - C1 -1Z47 - ? -
30 PsiBlast_CBE 67.6839% -48 - C1 -3C41 5.9 ?
41 PsiBlast_CBE 66.9042% -62 - C1 -4YMU 6.1 ?
140 HHSearch 66.7635%-115 - C1 -1Z47 - ? -
37 PsiBlast_CBE 66.0939% -49 - C1 -2OLK - ? -
38 PsiBlast_CBE 65.9839% -53 - C1 -2OLK 5.8 ?
40 PsiBlast_CBE 65.6542% -64 - C1 -4YMV 5.0 ?
16 PsiBlast_PDB 65.4642% -63 - C1 -4YMV 5.2 ?
15 PsiBlast_PDB 64.4442% -58 - C1 -4YMU 6.2 ?
7 PsiBlast_PDB 63.3439% -45 - C1 -3C41 6.5 ?
5 PsiBlast_PDB 61.9142% -46 - C1 -4U00 5.9 ?
43 PsiBlast_CBE 51.3942% -28 - C1 -3TIF 3.8 Y796_METJA
122 PsiBlast_CBE 41.3236% -39 - C1 -4AYX 4.0 ABCBA_HUMAN
113 PsiBlast_CBE 38.6331% -28 - C1 -1XEF 4.5 HLYBP_ECOLX
95 PsiBlast_CBE 37.6432% -29 - C1 -2FF7 5.0
94 PsiBlast_CBE 37.1832% -29 - C1 -2PMK 5.2
105 PsiBlast_CBE 36.3831% -17 - C1 -2FGJ 5.4
109 PsiBlast_CBE 36.0831% -28 - C1 -2FFA 5.0
108 PsiBlast_CBE 35.2031% -20 - C1 -2FGJ 5.7 HLYBP_ECOLX
111 PsiBlast_CBE 34.7231% -27 - C1 -1XEF 5.2 HLYBP_ECOLX
110 PsiBlast_CBE 34.6931% -24 - C1 -1XEF 5.7
97 PsiBlast_CBE 33.6531% -30 - C1 -3B5J 5.2
98 PsiBlast_CBE 33.2931% -22 - C1 -2FGK 6.0
112 PsiBlast_CBE 33.2631% -27 - C1 -1XEF 5.9 HLYBP_ECOLX
102 PsiBlast_CBE 32.9531% -25 - C1 -2FFB 5.0
107 PsiBlast_CBE 32.7531% -26 - C1 -2FGJ 6.0 HLYBP_ECOLX
100 PsiBlast_CBE 31.7431% -22 - C1 -2FGK 6.1 HLYBP_ECOLX
106 PsiBlast_CBE 31.6731% -21 - C1 -2FGJ 5.6 HLYBP_ECOLX
101 PsiBlast_CBE 31.6531% -22 - C1 -2FGK 6.2 HLYBP_ECOLX
99 PsiBlast_CBE 30.6731% -18 - C1 -2FGK 5.6 HLYBP_ECOLX