@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TZP5: (2017-12-16 )
MEPLIVIKGAKKIIRNKTILHLDRFTADAGDLVTVVGESGAGKSTLLNILGLNDQFSSGQFYLFDQETKQLTGREKRLIKRNTISFLFQDFGLIEYETIDFNLDIGLKFSNLNVSDKRTAKYEALKKVNINKKLSTPIYTLSGGEKQRIACARVLLKNSKIILADEPTGSLDKRNKDKVVEILSQQASQGTLVIVVTHDPYLTKIGNKKIML

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
84 HHSearch 82.2932% -98 * C2 *2PCL - LOLD_AQUAE -
4 PsiBlast_PDB 74.3036% 4 - C2 -3TIF - Y796_METJA -
5 PsiBlast_PDB 72.5837% -1 - C2 -1F3O - Y796_METJA -
3 PsiBlast_PDB 72.3836% 8 - C2 -1L2T - Y796_METJA -
22 PsiBlast_CBE 71.7336% 8 - C2 -3TIF 4.4 Y796_METJA
81 HHSearch 71.6523%-118 - C2 -3RLF - MALK_ECOLI -
88 HHSearch 71.1925%-111 - C2 -4TQU - ? -
21 PsiBlast_CBE 70.5436% 9 - C2 -1L2T 4.6 Y796_METJA
82 HHSearch 69.6923%-111 - C2 -2AWN - MALK_ECOLI -
6 PsiBlast_PDB 67.2335% -32 - C2 -2PCJ - LOLD_AQUAE -
80 HHSearch 67.1325%-105 - C2 -3FVQ - FBPC_NEIG1 -
7 PsiBlast_PDB 66.8135% -29 - C2 -2PCL - LOLD_AQUAE -
101 Fugue 66.3728% 19 - C2 -3TUZ - METN_ECOLI -
90 HHSearch 66.2825%-100 - C2 -2YYZ - ? -
25 PsiBlast_CBE 66.0031% -7 - C2 -3C4J 3.1 ?
30 PsiBlast_CBE 65.6431% -4 - C2 -2OLK 3.9 ?
24 PsiBlast_CBE 65.3431% -14 - C2 -3C41 3.9 ?
31 PsiBlast_CBE 65.2731% -10 - C2 -2OLK 4.1 ?
15 PsiBlast_PDB 64.4531% -13 - C2 -4YMT - ? -
9 PsiBlast_PDB 64.1331% 1 - C2 -2OLJ 3.8 ?
16 PsiBlast_PDB 63.7631% -8 - C2 -4YMU 4.7 ?
35 PsiBlast_CBE 63.5831% -9 - C2 -4YMU 4.2 ?
17 PsiBlast_PDB 63.3331% -11 - C2 -4YMV 5.4 ?
34 PsiBlast_CBE 63.2831% -15 - C2 -4YMV 3.4 ?
13 PsiBlast_PDB 62.8931% -7 - C2 -3C4J 4.8 ?
32 PsiBlast_CBE 62.6131% -2 - C2 -2OLK 3.9 ?
8 PsiBlast_PDB 62.0331% -7 - C2 -3C41 5.1 ?
10 PsiBlast_PDB 61.9331% -13 - C2 -2OLK 3.8 ?
26 PsiBlast_CBE 60.9631% -13 - C2 -2Q0H 3.8 ?
12 PsiBlast_PDB 59.7631% -1 - C2 -2Q0H 3.3 ?
33 PsiBlast_CBE 56.4031% -3 - C2 -2OLJ 3.5 ?