@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3TZY3: (2017-12-17 )
MQRNHICNIGGKNVGKPIISFDQVVKRYDDETVLKKVSFEIEQGKFYTLLGPSGCGKTTILRIIAGFTEATEGDIYFEGKRLNDLPANKRQVNTVFQDYALFPHMNVFDNVAFGLKIKKMSKSDIEKKVKDALRMVQLPGYEKREISEMSGGQRQRVAIARAIVNEPKVLLLDEPLSALDLKLRTDMQYELRDLQQRLGITFIFVTHDQEEALAMSDEIFVMNKGKIVQSGTPVDIYDEPINHFVADFVGESNIVDGVMIEDNLVEFVGKQFECVDGGMRLNEPVEVVLRPEDLTITTPDKGKLVVTVDTQLFRGVHYEIICYDEQQNEWMVHSTKKAKEGSKVGLAFEPEDIHVMRFNESEEEFDARLDSYEE

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_D_10(1MV5)

[Raw transfer]




POP_A_9(2D62)
?
[Raw transfer]




POP_A_9(2D62)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




5 PsiBlast_PDB 76.4641%-120 - C2 -1Z47 - ? -
158 HHSearch 76.3741% -89 - C2 -4TQU - ? -
171 HHSearch 75.5940% -76 - C2 -1V43 - ? -
155 HHSearch 73.8335% -89 - C2 -3RLF - MALK_ECOLI -
176 Fugue 73.6038% -1 - C2 -1Z47 - ? -
164 HHSearch 73.0038% -68 - C2 -2IT1 - ? -
1 PsiBlast_PDB 72.9947%-126 - C2 -4TQU - ? -
6 PsiBlast_PDB 72.9739% 8 - C2 -2D62 3.1 ?
4 PsiBlast_PDB 72.9147%-125 - C2 -4XTC - ? -
156 HHSearch 72.8035% -88 - C2 -2AWN - MALK_ECOLI -
166 HHSearch 72.2042% 15 - C2 -2D62 3.1 ?
160 HHSearch 71.8139% -60 - C2 -2YYZ - ? -
3 PsiBlast_PDB 71.4847%-123 - C2 -4XIG - ? -
19 PsiBlast_PDB 69.9544%-141 - C2 -3PUV - MALK_ECOLI -
159 HHSearch 69.8341% - - C2 -4TQV - ? -
27 PsiBlast_CBE 69.5444%-142 - C2 -3PUZ - MALK_ECOLI -
10 PsiBlast_PDB 69.4346%-124 - C2 -2IT1 - ? -
30 PsiBlast_CBE 69.1644%-136 - C2 -3PUX - MALK_ECOLI -
23 PsiBlast_CBE 68.7544%-133 - C2 -4KI0 - MALK_ECOLI -
16 PsiBlast_PDB 68.7444%-139 - C2 -3PUY - MALK_ECOLI -
52 PsiBlast_CBE 52.1931% -7 - C2 -3FVQ 7.5 FBPC_NEIG1
64 PsiBlast_CBE 47.9134% -14 - C2 -4YMV 5.9 ?
66 PsiBlast_CBE 47.4034% -18 - C2 -4YMU 5.8 ?
65 PsiBlast_CBE 47.3834% -18 - C2 -4YMU 5.7 ?
81 PsiBlast_CBE 44.1735% -15 - C2 -3C41 6.2 ?
68 PsiBlast_CBE 44.1535% -18 - C2 -3C4J 7.0 ?
67 PsiBlast_CBE 43.5235% -14 - C2 -3C4J 5.2 ?
82 PsiBlast_CBE 42.5735% -17 - C2 -3C41 7.0 ?
106 PsiBlast_CBE 40.1733% 14 - C2 -1B0U 6.1 HISP_SALTY
137 PsiBlast_CBE 27.4831% 26 - C2 -1MV5 4.9
140 PsiBlast_CBE 27.1931% 40 - C2 -1MV5 7.0 LMRA_LACLA
154 PsiBlast_CBE 18.3034% - - C2 -3B5Z 2.3 MSBA_SALTY