@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U0T7: (2017-12-18 )
MFIMKRIGILTSGGDAPGMNAAVRAVVRKGIYEGLEVYGINYGFAGLVAGDIRRLDVADVGDKIQRGGTFLYSARYPEFATEEGQLKGIEQLKKFGIEGLVVIGGDGSYHGAMALTKRGFPAVGIPGTIDNDIPGTDFTIGFDTAINTVLESIDRIRDTATSHVRTFVIEVMGRNAGDIALWSGVAGGADEIIIPEHDFDMASVAKKIQEGRDRGKKHCLIILAEGVMGGNEFAEKLSEFGDYHTRVSILGHVVRGGAPSARDRVLASKFGAYAVELLQEGKGGLCVGIHDNEIVASDIIDTLENNKHKPDLSLYDLNNSLSF

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEP_C_7(4I4I)
PFKA_GEOSE
[Raw transfer]




PEP_B_6(4I7E)
PFKA_GEOSE
[Raw transfer]




PGA_C_7(6PFK)
PFKA_GEOSE
[Raw transfer]




PEP_B_6(4I4I)
PFKA_GEOSE
[Raw transfer]




PEP_C_7(4I7E)
PFKA_GEOSE
[Raw transfer]




PGA_A_5(6PFK)
PFKA_GEOSE
[Raw transfer]




ADP_A_6(4PFK)
PFKA_GEOSE
[Raw transfer]




PEP_A_5(4I4I)
PFKA_GEOSE
[Raw transfer]




PGA_D_8(6PFK)
PFKA_GEOSE
[Raw transfer]




PGA_B_6(6PFK)
PFKA_GEOSE
[Raw transfer]




PEP_D_8(4I7E)
PFKA_GEOSE
[Raw transfer]




PEP_A_5(4I7E)
PFKA_GEOSE
[Raw transfer]




PEP_D_8(4I7E)
PFKA_GEOSE
[Raw transfer]




PEP_D_8(4I4I)
PFKA_GEOSE
[Raw transfer]




23 PsiBlast_CBE 94.2467%-109 - C5 -6PFK 2.9 PFKA_GEOSE
1 PsiBlast_PDB 93.7867%-112 - C5 -6PFK 3.0 PFKA_GEOSE
4 PsiBlast_PDB 93.7266%-116 - C5 -4PFK 5.3 PFKA_GEOSE
21 PsiBlast_CBE 93.3667%-112 - C5 -6PFK 2.9 PFKA_GEOSE
29 PsiBlast_CBE 93.1966%-114 - C5 -4I4I 3.0 PFKA_GEOSE
3 PsiBlast_PDB 93.1966%-116 - C5 -3PFK - PFKA_GEOSE -
22 PsiBlast_CBE 93.1567%-115 - C5 -6PFK 2.5 PFKA_GEOSE
27 PsiBlast_CBE 92.9066%-115 - C5 -4I4I 2.7 PFKA_GEOSE
7 PsiBlast_PDB 92.5166%-111 - C5 -4I7E 3.3 PFKA_GEOSE
6 PsiBlast_PDB 92.4466%-114 - C- -4I36 - PFKA_GEOSE -
5 PsiBlast_PDB 92.4066%-109 - C5 -4I4I 3.0 PFKA_GEOSE
28 PsiBlast_CBE 92.1966%-113 - C5 -4I4I 2.9 PFKA_GEOSE
30 PsiBlast_CBE 92.1466%-112 - C5 -4I7E 3.1 PFKA_GEOSE
10 PsiBlast_PDB 92.0860%-119 - C5 -1ZXX - PFKA_LACDE -
31 PsiBlast_CBE 92.0466%-112 - C5 -4I7E 3.1 PFKA_GEOSE
32 PsiBlast_CBE 92.0366%-108 - C5 -4I7E 2.8 PFKA_GEOSE
2 PsiBlast_PDB 91.9667%-114 - C5 -3U39 - PFKA_GEOSE -
39 PsiBlast_CBE 91.7666%-113 - C5 -1MTO - PFKA_GEOSE -
8 PsiBlast_PDB 91.6666%-115 - C5 -1MTO - PFKA_GEOSE -
37 PsiBlast_CBE 91.3566%-114 - C5 -1MTO - PFKA_GEOSE -
81 HHSearch 88.3467% -79 - C5 -4I7E 3.1 PFKA_GEOSE