@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U0Z7: (2017-12-18 )
MITVSRKKRGSKKMKTYTFPENFWWGSAASGPQTEGRVSDDGKGENIWDHWYELEPEKFFDQVGPEKTSQVYTKYKEDVQLMKETGHNTFRTSIQWSHLIPEGTGEINQKAVSFYRDYFTELLDNGIEPFVNLYHFDMPLPLQEKGGWLSRETVDAYVSYAAACFELFGDLVKKWFTHNEPIVPVEGGYLYQFHYPNHINMKEAVQVGYHENLASAKVIKAYHEGGHDGEIGIILNLTPSYPRDETNPEDVKAAKIADAFFNRSFLDPAVKGEFPQELIEIVKELAIMPEIHEGDLELIRENTIDLLGINYYQPRRIKAKETPINHEHSPMPDDYFDNYDMPNKKMNPYRGWEIYEKGIYDILTNTRENYGNIKCYISENGMGVEGEERFVNSEGIIEDDYRIEFVTDHLKYVHQAIQEGTNCVGYHMWTCMDNWSWTNAYKNRYGFIAVDLAQDGKRTIKKSGRWFKTVSEKNGFDA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NOY_B_6(2J75)
BGLA_THEMA
[Raw transfer]




TCB_A_3(4PTV)
?
[Raw transfer]




BGC_A_2(4HZ7)
?
[Raw transfer]




NOY_A_4(2J75)
BGLA_THEMA
[Raw transfer]




NOJ_A_3(1OIM)
BGLA_THEMA
[Raw transfer]




IFL_A_3(1UZ1)
BGLA_THEMA
[Raw transfer]




TCB_B_6(4PTV)
?
[Raw transfer]




CTS_B_6(2CBU)
BGLA_THEMA
[Raw transfer]




CGB_A_3(2CBV)
BGLA_THEMA
[Raw transfer]




OXZ_A_3(1W3J)
BGLA_THEMA
[Raw transfer]




IFM_A_3(1OIF)
BGLA_THEMA
[Raw transfer]




BGC_B_5(4PTX)
?
[Raw transfer]




OXZ_B_4(1W3J)
BGLA_THEMA
[Raw transfer]




AZF_B_7(2J7H)
BGLA_THEMA
[Raw transfer]




BGC_A_3(4PTX)
?
[Raw transfer]




SRT_A_24(3CMJ)
?
[Raw transfer]




NOJ_B_4(1OIM)
BGLA_THEMA
[Raw transfer]




YLL_B_6(2JAL)
BGLA_THEMA
[Raw transfer]




IFM_B_4(1OIF)
BGLA_THEMA
[Raw transfer]




G2F_B_5(4PTW)
?
[Raw transfer]




G2F_A_3(4PTW)
?
[Raw transfer]




27 PsiBlast_CBE 86.9740% -40 - C3 -3AHX - ? -
4 PsiBlast_PDB 86.7040% -40 - C3 -3AHX - ? -
28 PsiBlast_CBE 86.1840% -39 - C3 -3AHX - ? -
26 PsiBlast_CBE 86.0740% -38 - C3 -3AHX - ? -
73 PsiBlast_CBE 85.4634% -75 - C3 -1BGG - BGLA_PAEPO -
75 PsiBlast_CBE 85.2634% -75 - C3 -1BGG - BGLA_PAEPO -
80 PsiBlast_CBE 85.1234% -74 - C3 -1TR1 - BGLA_PAEPO -
128 HHSearch 85.0034% -77 * C3 *1E4I - BGLA_PAEPO -
74 PsiBlast_CBE 84.8234% -75 - C3 -1BGG - BGLA_PAEPO -
79 PsiBlast_CBE 84.7434% -74 - C3 -1TR1 - BGLA_PAEPO -
76 PsiBlast_CBE 84.7034% -75 - C3 -1E4I - BGLA_PAEPO -
78 PsiBlast_CBE 84.6434% -74 - C3 -1TR1 - BGLA_PAEPO -
77 PsiBlast_CBE 84.6334% -74 - C3 -1TR1 - BGLA_PAEPO -
81 PsiBlast_CBE 84.6234% -76 - C3 -1UYQ - BGLA_PAEPO -
3 PsiBlast_PDB 82.8546% 26 - C3 -5FOO - ? -
97 PsiBlast_CBE 82.5834% -50 - C3 -5GNZ - ? -
30 PsiBlast_CBE 82.5138% -39 - C3 -4PTW 2.8 ?
94 PsiBlast_CBE 82.4234% -47 - C3 -5GNZ - ? -
99 PsiBlast_CBE 82.3534% -49 - C3 -5GNZ - ? -
92 PsiBlast_CBE 82.1834% -49 - C3 -5GNZ - ? -
29 PsiBlast_CBE 81.9838% -41 - C3 -4PTX 3.4 ?
8 PsiBlast_PDB 81.9438% -37 - C3 -4PTX 3.5 ?
7 PsiBlast_PDB 81.7138% -37 - C3 -4PTW 2.6 ?
13 PsiBlast_PDB 78.7135% -41 - C3 -1UZ1 3.8 BGLA_THEMA
82 PsiBlast_CBE 76.8533% -22 - C3 -3CMJ 3.3 ?
86 PsiBlast_CBE 76.4333% -24 - C3 -4HZ7 3.7 ?