@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U1G8: (2017-12-20 )
MARERSGKMNDLLKQYFGYDEFRPGQKEIIQKVIDQENVLGIMPTGSGKSICYQLPALLLDGLTVVVSPLISLMKDQVDAANQLGIPATFINSSLDGYETARRFQEIDRQQYRLLYIAPERFIMPDFIQAMKRWNVRMIAIDEAHCISQWGHDFRPSYLQMANQLDQLPNRPVIVALTATATVQVAADIKRLLKIPENNHIQTGFERENLRFQVIKDQKKEQYLIEYLKINKNQSGIIYAATRKEVDRLYHLLKKFDFSVGRYHGGLNENERTEMQEAFLYDRLQLIVATNAFGMGINKSNVRFVIHYQIPGSLEAYYQEAGRAGRDGLSSEAILLFSPQDIQVQKFFIQQSQREEGQKQKEYEKLKAMTEYVYIESCLQQYILNYFGETSSPCNRCGNCLDDREIVEVTTEAQMVLSCLKRMGENYGKQMLMKVLAGSKEQKLQALGFGHLSTYGLMKNQSQKETMQLIEYLISNGYLLTINGEYPVLKVTERGIQVLKGQESVYRKEPKKVQQLSDEETDTLFEVLRELRTDLASEAGVPPYVVFSDSTLKEMSRIRPSSRLEMLQIKGVGQSKLDKYGEAFLSRIKNADSNVLDK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_A_5(1OYY)
RECQ_ECOLI
[Raw transfer]



ADP_B_5(4Q47)
?
[Raw transfer]



ADP_A_3(2V1X)
RECQ1_HUMAN
[Raw transfer]



ADP_A_3(2V1X)
RECQ1_HUMAN
[Raw transfer]



ADP_B_4(5LB3)
RECQ5_HUMAN
[Raw transfer]



ADP_B_10(2V1X)
RECQ1_HUMAN
[Raw transfer]



ADP_B_4(5LB3)
RECQ5_HUMAN
[Raw transfer]



ADP_A_6(4O3M)
BLM_HUMAN
[Raw transfer]



ADP_A_3(4Q47)
?
[Raw transfer]



ADP_A_3(4Q47)
?
[Raw transfer]



ADP_A_6(4O3M)
BLM_HUMAN
[Raw transfer]



ADP_E_7(5LB3)
RECQ5_HUMAN
[Raw transfer]
2 PsiBlast_PDB 87.7040% -97 - C3 -4TMU - ? -
56 HHSearch 86.6740% -99 - C3 -1OYW - RECQ_ECOLI -
3 PsiBlast_PDB 85.9040% -92 - C3 -1OYW - RECQ_ECOLI -
1 PsiBlast_PDB 85.7441% -89 - C3 -1OYY 7.4 RECQ_ECOLI
55 HHSearch 84.0540% -71 - C3 -4Q48 - ? -
22 PsiBlast_CBE 84.0041% -70 - C3 -4Q47 5.7 ?
54 HHSearch 83.2840% -77 - C3 -4Q47 4.3 ?
5 PsiBlast_PDB 83.0541% -68 - C3 -4Q48 - ? -
4 PsiBlast_PDB 83.0541% -73 - C3 -4Q47 4.3 ?
6 PsiBlast_PDB 75.3131% -2 - C3 -4CDG - BLM_HUMAN -
23 PsiBlast_CBE 74.0231% -3 - C3 -4CDG - BLM_HUMAN -
8 PsiBlast_PDB 73.1631% -1 - C3 -4CGZ - BLM_HUMAN -
53 HHSearch 72.2432% 14 - C3 -4O3M 7.8 BLM_HUMAN
58 HHSearch 70.7333% -30 - C3 -2V1X 7.3 RECQ1_HUMAN
9 PsiBlast_PDB 70.1436% -32 - C3 -2V1X 7.4 RECQ1_HUMAN
11 PsiBlast_PDB 69.8636% -31 - C3 -4U7D - RECQ1_HUMAN -
25 PsiBlast_CBE 69.7936% -32 - C3 -2V1X 6.7 RECQ1_HUMAN
57 HHSearch 69.5233% -25 - C3 -4U7D - RECQ1_HUMAN -
10 PsiBlast_PDB 68.4136% -21 - C3 -2WWY - RECQ1_HUMAN -
7 PsiBlast_PDB 68.3931% 9 - C3 -4O3M 7.9 BLM_HUMAN
12 PsiBlast_PDB 63.7136% 16 - C3 -5LB3 6.7 RECQ5_HUMAN
59 HHSearch 63.2336% 4 - C3 -5LB3 6.7 RECQ5_HUMAN
35 PsiBlast_CBE 62.3536% 9 - C3 -5LB3 6.6 RECQ5_HUMAN