@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U1P9: (2017-12-21 )
MISKKSKDKEELKMTAIYNSVTELIGKTPIVKLNKIVPEDSADVFVKLEFFNPGGSVKDRIALSMIEKAEHDGLLKPGDTIIEPTSGNTGIGLSMVGVAKGYKVIIVMPETMSIERRLLMKGYGAELILTPGADGISGSIREAERLAKENGYFLPLQFENEANPLVHEKTTGPEIHQAFGVNGLDAFVAGIGTGGTITGAGRELKRVYPKSRINRGRTSRICYFRRERSGTSQNPRNRYRFCS

Atome Classification :

(66 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KOU_A_3(3PC4)
?
[Raw transfer]



P1T_A_3(3PC3)
?
[Raw transfer]



P1T_A_3(3PC3)
?
[Raw transfer]



PUS_A_3(3X44)
DCSD_STRLA
[Raw transfer]



PUS_B_4(3X44)
DCSD_STRLA
[Raw transfer]



CYS_A_2(4LMB)
?
[Raw transfer]



4AT_A_4(2EFY)
?
[Raw transfer]



4AT_B_6(2EFY)
?
[Raw transfer]



AWH_A_3(3ZEI)
CYSK_MYCTU
[Raw transfer]



CIT_A_4(2V03)
CYSM_ECOLI
[Raw transfer]



4MV_A_3(2ECO)
?
[Raw transfer]



PLP_A_3(4L0D)
CBS_HUMAN
[Raw transfer]



PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_B_5(4L0D)
CBS_HUMAN
[Raw transfer]



PLP_B_18(4COO)
CBS_HUMAN
[Raw transfer]



PLP_B_10(3BM5)
?
[Raw transfer]



PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]



PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]



PLP_B_18(4COO)
CBS_HUMAN
[Raw transfer]



PLP_A_3(2EFY)
?
[Raw transfer]



PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_C_9(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_A_3(1VE1)
?
[Raw transfer]



PLP_A_3(3PC2)
?
[Raw transfer]



PLP_B_7(4PCU)
CBS_HUMAN
[Raw transfer]



PLP_B_5(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_B_5(2EFY)
?
[Raw transfer]



PLP_A_4(4PCU)
CBS_HUMAN
[Raw transfer]



PLP_A_2(2ECQ)
?
[Raw transfer]



PLP_A_2(2ECO)
?
[Raw transfer]



PLP_A_7(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_D_11(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_A_9(3BM5)
?
[Raw transfer]



PLP_B_6(2PQM)
?
[Raw transfer]



PLP_A_5(2PQM)
?
[Raw transfer]



PLP_B_8(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_A_7(2ISQ)
CYSK1_ARATH
[Raw transfer]



PLP_E_5(1D6S)
CYSK_SALTY
[Raw transfer]



PLP_D_4(1D6S)
CYSK_SALTY
[Raw transfer]



3HL_A_3(2ECQ)
?
[Raw transfer]



OAS_B_3(5HBG)
CYSM_HELPY
[Raw transfer]



MPD_A_4(2Q3B)
CYSK_MYCTU
[Raw transfer]



CYS_A_3(4LMB)
?
[Raw transfer]



MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]



PLP_A_7(2ISQ)
CYSK1_ARATH
[Raw transfer]



PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]



PLP_A_5(4LMA)
?
[Raw transfer]



PLP_B_7(4LMA)
?
[Raw transfer]



PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_B_4(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_A_4(4LMB)
?
[Raw transfer]



PLP_B_15(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_C_14(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_A_13(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_D_16(1FCJ)
CYSK_SALTY
[Raw transfer]



MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]
1 PsiBlast_PDB 87.4867% 0 - C- -2EGU - ? -
133 HHSearch 83.3346% -55 - C4 -3X44 - DCSD_STRLA -
127 HHSearch 79.0843% 0 - C- -4QL4 - ? -
106 PsiBlast_CBE 78.5746% 0 - C- -4AIR - ? -
105 PsiBlast_CBE 78.5746% 0 - C- -4AIR - ? -
119 HHSearch 78.0048% -35 - C4 -2Q3B 2.6 CYSK_MYCTU
55 PsiBlast_CBE 77.9151% -80 - C4 -3X43 - DCSD_STRLA -
117 HHSearch 76.9646% -39 - C4 -5XA2 - ? -
18 PsiBlast_PDB 76.8151% -85 - C4 -3X43 - DCSD_STRLA -
51 PsiBlast_CBE 76.7251% -79 - C4 -3X43 - DCSD_STRLA -
123 HHSearch 76.2548% -29 - C4 -2Q3D - CYSK_MYCTU -
20 PsiBlast_PDB 76.2050% -78 - C4 -3X44 3.2 DCSD_STRLA
56 PsiBlast_CBE 76.1351% -79 - C4 -3X43 - DCSD_STRLA -
53 PsiBlast_CBE 75.9751% -81 - C4 -3X43 - DCSD_STRLA -
52 PsiBlast_CBE 75.7651% -79 - C4 -3X43 - DCSD_STRLA -
58 PsiBlast_CBE 75.6550% -78 - C4 -3X44 3.0 DCSD_STRLA
50 PsiBlast_CBE 74.3251% -77 - C4 -3X43 - DCSD_STRLA -
54 PsiBlast_CBE 74.1351% -77 - C4 -3X43 - DCSD_STRLA -
7 PsiBlast_PDB 73.0256% -88 - C4 -4I1Y - ? -
8 PsiBlast_PDB 72.7752% -56 - C4 -5XA2 - ? -
2 PsiBlast_PDB 72.3356% -73 - C4 -3ZEI 4.1 CYSK_MYCTU
4 PsiBlast_PDB 72.2355% -77 - C4 -2Q3B 3.0 CYSK_MYCTU
135 HHSearch 72.1443% 27 - C4 -3PC3 6.5 ?
85 PsiBlast_CBE 72.0947% -53 - C4 -2V03 1.8 CYSM_ECOLI
63 PsiBlast_CBE 71.9148% -55 - C4 -2BHS 4.1 CYSM_ECOLI
65 PsiBlast_CBE 71.2348% -56 - C4 -2BHS 3.6 CYSM_ECOLI
61 PsiBlast_CBE 71.1047% 28 - C4 -3PC2 4.0 ?
59 PsiBlast_CBE 70.4447% 33 - C4 -3PC4 4.8 ?
60 PsiBlast_CBE 70.3647% 32 - C4 -3PC3 7.1 ?
64 PsiBlast_CBE 70.1748% -58 - C4 -2BHS 3.5 CYSM_ECOLI
62 PsiBlast_CBE 69.2948% -55 - C4 -2BHS 4.0 CYSM_ECOLI
137 HHSearch 69.0144% 7 - C4 -4AEC 3.6 CYSKM_ARATH
19 PsiBlast_PDB 68.4449% 38 - C4 -4COO 3.4 CBS_HUMAN
115 PsiBlast_CBE 68.4343% 8 - C4 -5HBG 0.7 CYSM_HELPY
44 PsiBlast_CBE 68.3349% 33 - C4 -4L0D 3.1 CBS_HUMAN
57 PsiBlast_CBE 68.2749% 38 - C4 -4COO 3.3 CBS_HUMAN
67 PsiBlast_CBE 68.1752% 10 - C4 -2EFY 3.8 ?
118 HHSearch 68.1045% 47 - C4 -4COO 2.8 CBS_HUMAN
16 PsiBlast_PDB 68.1049% 35 - C4 -4L0D 3.4 CBS_HUMAN
10 PsiBlast_PDB 68.0749% 39 - C4 -4PCU 3.3 CBS_HUMAN
25 PsiBlast_CBE 68.0049% 37 - C4 -4PCU 3.1 CBS_HUMAN
124 HHSearch 67.9346% 14 - C4 -2ISQ 3.6 CYSK1_ARATH
66 PsiBlast_CBE 67.7252% 11 - C4 -2EFY 3.4 ?
128 HHSearch 67.6446% 11 - C4 -1Z7W 3.7 CYSK1_ARATH
81 PsiBlast_CBE 67.1349% 10 - C4 -4AEC 3.6 CYSKM_ARATH
68 PsiBlast_CBE 66.4052% 14 - C4 -2ECQ 3.9 ?
82 PsiBlast_CBE 66.2549% 12 * C4 *4AEC 4.0 CYSKM_ARATH
69 PsiBlast_CBE 66.1052% 12 - C4 -2ECO 3.7 ?
70 PsiBlast_CBE 65.9752% 14 - C4 -1VE1 3.6 ?
89 PsiBlast_CBE 65.2350% -35 - C4 -1FCJ 2.9 CYSK_SALTY
95 PsiBlast_CBE 64.7650% -36 - C4 -1D6S 3.8 CYSK_SALTY
91 PsiBlast_CBE 64.6950% -41 - C4 -1FCJ 3.0 CYSK_SALTY
96 PsiBlast_CBE 64.6350% -35 - C4 -1D6S 3.6 CYSK_SALTY
88 PsiBlast_CBE 64.2750% -35 - C4 -1FCJ 3.0 CYSK_SALTY
87 PsiBlast_CBE 64.2350% -42 - C4 -1OAS 3.0 CYSK_SALTY
86 PsiBlast_CBE 64.1850% -43 - C4 -1OAS 2.8 CYSK_SALTY
90 PsiBlast_CBE 64.0850% -37 - C4 -1FCJ 3.0 CYSK_SALTY
71 PsiBlast_CBE 62.0053% -4 - C4 -1Z7W 3.0 CYSK1_ARATH
83 PsiBlast_CBE 61.9553% -1 - C4 -2ISQ 3.0 CYSK1_ARATH
109 PsiBlast_CBE 60.3844% 18 - C4 -2PQM 3.5 ?
110 PsiBlast_CBE 60.2444% 12 - C4 -2PQM 3.9 ?
108 PsiBlast_CBE 58.9744% 10 - C4 -3BM5 3.4 ?
107 PsiBlast_CBE 58.2544% 20 - C4 -3BM5 3.8 ?
92 PsiBlast_CBE 57.0349% 25 - C4 -4LMA 3.1 ?
80 PsiBlast_CBE 55.7652% 29 - C4 -4LMB 3.3 ?
93 PsiBlast_CBE 55.5949% 31 - C4 -4LMA 3.1 ?