@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U2E8: (2017-12-22 )
MTKNKLLLVDGNSVAFRAFFPLHNSLERFKNRNGLHTNAIYAFNTMFENVMQKEQPTHVLVAFDAGKTTFRTEMYAEYKGGRSKTPGEFKEQMPYIRDLLTGLGVQYYELPNYEADDIIGTLAEKVDKDQFDVVVLSGDRDLTQLASKEVKVDITVKGVSDIESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIYEHIDEMKQSKMKENLINDKEQAFLSKKLATINTSAPVDVSIDSLKYEGKNLDKLVPFYKEMDFNQFLSKLNIVEEEVKMDDILFEVVHEFKEEMFTTDMALYVEMMGDNYHTEEIVGVAWGTEKKIYVTNDLSVFENRAFHSWITDPTRLKKVYDAKRTYVALNRYTGKTKGIDFDVLLGAYLLDTNEKSTDIEGIAAHYGYNDIQSDEAVYGKGAKKGLPEEEELFFAHLARKVAAINALTPKLSQELAEKNQEDLFRKMELPLSIILAEMEISGIKVDATRLQEMKGEFSARLREIEQKIYEEAGEEFNLNSPKQLGVILFEKMGLPVIKKTKTGYSTAVDVLEQLREQAPIVEDILTYRQIAKIQSTYVEGLLKVIQSDGKVHTRYVQTLTQTGRLSSVDPNLQNIPIRLDEGRKIRQAFVPREKDWLIYSSDYSQIELRVLAHISNDEHLKAAFLEGQDIHASTAMRVFGIEKAEDVTPNMRRQAKAVNFGIVYGISDYGLSQNLGISRKAAQQYIDTYFEKYPGVKEYMERIVREAKDQGYVETLYHRRRYLPDINSRNYNIRSFAERTAINTPIQGSAADILKIAMIELDKRLKETGLQATMLLQVHDELVFEVPEKELESLDKLVKEVMEQAVSLHVPLITDSSWGKTWYEAK

Atome Classification :

(81 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_F_4(1LV5)
DPO1_GEOSE
[Raw transfer]
-
NACID_F_4(1LV5)
DPO1_GEOSE
[Raw transfer]
-
NACID_T_2(4BDP)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4DQS)
?
[Raw transfer]
-
NACID_C_3(3TAP)
?
[Raw transfer]
-
SUC_A_5(1NKE)
DPO1_GEOSE
[Raw transfer]



SUC_D_4(1NK0)
DPO1_GEOSE
[Raw transfer]



SUC_A_5(1NKB)
DPO1_GEOSE
[Raw transfer]



SUC_A_5(1NJW)
?
[Raw transfer]



SUC_A_6(1NK8)
DPO1_GEOSE
[Raw transfer]



MES_A_6(2XY6)
?
[Raw transfer]



NACID_C_3(4B9T)
?
[Raw transfer]
-
NACID_C_2(2HHQ)
?
[Raw transfer]
-
NACID_T_2(2BDP)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HHS)
?
[Raw transfer]
-
NACID_C_3(4B9M)
?
[Raw transfer]
-
NACID_C_3(2XO7)
?
[Raw transfer]
-
AF_C_7(1UA0)
?
[Raw transfer]



NACID_C_3(2XY6)
?
[Raw transfer]
-
NACID_C_3(4UQG)
?
[Raw transfer]
-
BAP_C_10(1XC9)
DPO1_GEOSE
[Raw transfer]



NACID_C_2(2HW3)
?
[Raw transfer]
-
NACID_C_2(2HHU)
?
[Raw transfer]
-
SUC_A_6(1NJX)
DPO1_GEOSE
[Raw transfer]



NACID_C_3(2Y1I)
?
[Raw transfer]
-
AF_C_7(1UA1)
DPO1_GEOSE
[Raw transfer]



NACID_C_3(4B9L)
?
[Raw transfer]
-
NACID_C_3(4B9N)
?
[Raw transfer]
-
NACID_C_3(4B9V)
?
[Raw transfer]
-
NACID_C_2(2HHX)
DPO1_BACCA
[Raw transfer]
-
NACID_P_1(3BDP)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HHT)
?
[Raw transfer]
-
NACID_C_3(2XY5)
?
[Raw transfer]
-
NACID_C_3(2XY7)
?
[Raw transfer]
-
NACID_C_2(2HHV)
?
[Raw transfer]
-
NACID_C_3(2Y1J)
?
[Raw transfer]
-
NACID_C_3(3TAN)
?
[Raw transfer]
-
NACID_D_2(1LV5)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4B9U)
?
[Raw transfer]
-
NACID_C_3(4B9S)
?
[Raw transfer]
-
NACID_C_4(4DSF)
?
[Raw transfer]
-
NACID_C_4(4DSE)
?
[Raw transfer]
-
NACID_C_4(3PX4)
?
[Raw transfer]
-
NACID_C_4(4F2R)
?
[Raw transfer]
-
NACID_C_4(4F4K)
?
[Raw transfer]
-
NACID_C_4(4F8R)
?
[Raw transfer]
-
NACID_C_4(4DS4)
?
[Raw transfer]
-
NACID_C_3(3TAR)
?
[Raw transfer]
-
NACID_C_3(3TAQ)
?
[Raw transfer]
-
NACID_C_4(4EZ9)
?
[Raw transfer]
-
NACID_C_4(4F2S)
?
[Raw transfer]
-
NACID_F_6(4DS5)
?
[Raw transfer]
-
NACID_F_6(3THV)
?
[Raw transfer]
-
NACID_F_6(4EZ6)
?
[Raw transfer]
-
NACID_F_6(4F4K)
?
[Raw transfer]
-
NACID_F_6(4DSE)
?
[Raw transfer]
-
NACID_C_4(3PX0)
?
[Raw transfer]
-
NACID_C_4(3PV8)
?
[Raw transfer]
-
NACID_F_6(3PV8)
?
[Raw transfer]
-
NACID_C_4(3TI0)
?
[Raw transfer]
-
NACID_F_6(3TI0)
?
[Raw transfer]
-
NACID_F_6(4DSF)
?
[Raw transfer]
-
NACID_F_6(3PX0)
?
[Raw transfer]
-
NACID_C_4(3THV)
?
[Raw transfer]
-
NACID_F_6(4EZ9)
?
[Raw transfer]
-
NACID_F_6(3PX4)
?
[Raw transfer]
-
NACID_F_6(4F8R)
?
[Raw transfer]
-
NACID_F_6(4DQI)
?
[Raw transfer]
-
NACID_C_4(4DS5)
?
[Raw transfer]
-
NACID_C_4(4DQP)
?
[Raw transfer]
-
NACID_F_6(4F2S)
?
[Raw transfer]
-
NACID_F_6(4DQP)
?
[Raw transfer]
-
NACID_F_6(3PX6)
?
[Raw transfer]
-
NACID_C_4(3PX6)
?
[Raw transfer]
-
NACID_F_6(4F3O)
?
[Raw transfer]
-
NACID_C_4(4DQI)
?
[Raw transfer]
-
NACID_F_6(4DS4)
?
[Raw transfer]
-
NACID_F_6(4F2R)
?
[Raw transfer]
-
96 PsiBlast_CBE 91.0358% -48 - C4 -1L3S - DPO1_GEOSE -
19 PsiBlast_PDB 90.6158% -52 - C4 -2Y1J 9.5 ?
10 PsiBlast_PDB 90.6058% -51 - C4 -4B9T 6.8 ?
71 PsiBlast_CBE 90.5258% -48 - C4 -2HHV 14.2 ?
80 PsiBlast_CBE 90.4358% -49 - C4 -1NKB 3.5 DPO1_GEOSE
73 PsiBlast_CBE 90.3658% -50 - C4 -2HHT 11.7 ?
30 PsiBlast_CBE 90.3458% -50 - C4 -2BDP 14.0 DPO1_GEOSE
11 PsiBlast_PDB 90.3358% -52 - C4 -4B9U 7.5 ?
89 PsiBlast_CBE 90.2858% -50 - C4 -1NJY - DPO1_GEOSE -
12 PsiBlast_PDB 90.2858% -50 - C4 -4B9V 6.4 ?
5 PsiBlast_PDB 90.2858% -50 - C4 -4UQG 9.9 ?
79 PsiBlast_CBE 90.2558% -48 - C4 -1NKC - DPO1_GEOSE -
78 PsiBlast_CBE 90.2558% -49 - C4 -1NKE 3.1 DPO1_GEOSE
64 PsiBlast_CBE 90.2458% -49 - C4 -1U4B - DPO1_GEOSE -
28 PsiBlast_CBE 90.2358% -45 - C4 -4BDP 13.4 DPO1_GEOSE
92 PsiBlast_CBE 90.2258% -48 - C4 -1L5U - DPO1_GEOSE -
74 PsiBlast_CBE 90.2258% -49 - C4 -2HHS 7.1 ?
9 PsiBlast_PDB 90.2158% -48 - C4 -4B9S 12.4 ?
8 PsiBlast_PDB 90.1958% -47 - C4 -4B9N 7.4 ?
1 PsiBlast_PDB 90.1858% -52 - C4 -2XY7 12.8 ?
7 PsiBlast_PDB 90.1058% -49 - C4 -4B9M 7.0 ?
41 PsiBlast_CBE 90.0457% -52 - C4 -4F2R 16.6 ?
4 PsiBlast_PDB 90.0358% -53 - C4 -2XY6 9.4 ?
75 PsiBlast_CBE 90.0158% -48 - C4 -2HHQ 11.4 ?
6 PsiBlast_PDB 90.0158% -50 - C4 -4B9L 13.4 ?
29 PsiBlast_CBE 89.9858% -48 - C4 -3BDP 7.2 DPO1_GEOSE
2 PsiBlast_PDB 89.9758% -50 - C4 -2XO7 11.9 ?
62 PsiBlast_CBE 89.9658% -48 - C4 -1UA1 3.0 DPO1_GEOSE
3 PsiBlast_PDB 89.9658% -52 - C4 -2XY5 9.4 ?
69 PsiBlast_CBE 89.9258% -49 - C4 -2HW3 12.2 ?
14 PsiBlast_PDB 89.8557% -48 - C4 -3TAP 11.9 ?
15 PsiBlast_PDB 89.8157% -49 - C4 -3TAQ 11.0 ?
82 PsiBlast_CBE 89.7758% -49 - C4 -1NK8 3.3 DPO1_GEOSE
72 PsiBlast_CBE 89.7658% -48 - C4 -2HHU 12.9 ?
63 PsiBlast_CBE 89.7358% -51 - C4 -1UA0 4.0 ?
77 PsiBlast_CBE 89.7258% -49 - C4 -1XC9 4.3 DPO1_GEOSE
39 PsiBlast_CBE 89.7257% -52 - C4 -4F2S 16.7 ?
18 PsiBlast_PDB 89.7258% -52 - C4 -2Y1I 9.2 ?
31 PsiBlast_CBE 89.6858% -49 - C4 -1LV5 12.8 DPO1_GEOSE
87 PsiBlast_CBE 89.6658% -48 - C4 -1NK0 3.4 DPO1_GEOSE
91 PsiBlast_CBE 89.6558% -48 - C4 -1NJW 3.3 ?
90 PsiBlast_CBE 89.4858% -47 - C4 -1NJX 2.7 DPO1_GEOSE
13 PsiBlast_PDB 89.4457% -47 - C4 -3TAN 8.4 ?
35 PsiBlast_CBE 89.3857% -50 - C4 -4F4K 17.1 ?
40 PsiBlast_CBE 89.3257% -52 - C4 -4F2R 18.3 ?
16 PsiBlast_PDB 89.3257% -51 - C4 -3TAR 9.1 ?
44 PsiBlast_CBE 89.2257% -49 - C4 -4EZ6 17.1 ?
25 PsiBlast_CBE 89.1857% -50 - C4 -4DQP 16.7 ?
38 PsiBlast_CBE 89.1757% -52 - C4 -4F2S 18.2 ?
50 PsiBlast_CBE 89.1457% -48 - C4 -3TI0 17.1 ?
27 PsiBlast_CBE 89.1157% -51 - C4 -4DQI 17.5 ?
26 PsiBlast_CBE 89.0457% -50 - C4 -4DQP 16.6 ?
60 PsiBlast_CBE 89.0357% -50 - C4 -3PV8 17.3 ?
42 PsiBlast_CBE 88.9857% -49 - C4 -4EZ9 17.7 ?
70 PsiBlast_CBE 88.9458% -51 - C4 -2HHX 13.7 DPO1_BACCA
48 PsiBlast_CBE 88.8957% -48 - C4 -4DSE 17.3 ?
54 PsiBlast_CBE 88.8857% -51 - C4 -3PX6 18.3 ?
52 PsiBlast_CBE 88.8257% -49 - C4 -3THV 17.9 ?
36 PsiBlast_CBE 88.8057% -50 - C4 -4F4K 16.4 ?
51 PsiBlast_CBE 88.7957% -50 - C4 -3TI0 15.7 ?
56 PsiBlast_CBE 88.7657% -50 - C4 -3PX4 17.7 ?
37 PsiBlast_CBE 88.7357% -49 - C4 -4F3O 17.3 ?
43 PsiBlast_CBE 88.6957% -50 - C4 -4EZ9 16.9 ?
34 PsiBlast_CBE 88.6757% -49 - C4 -4F8R 14.6 ?
32 PsiBlast_CBE 88.6658% -45 - C4 -1LV5 Error DPO1_GEOSE
46 PsiBlast_CBE 88.6057% -47 - C4 -4DSF 17.4 ?
53 PsiBlast_CBE 88.5557% -50 - C4 -3THV 15.6 ?
22 PsiBlast_CBE 88.5157% -50 - C4 -4DS5 17.3 ?
58 PsiBlast_CBE 88.4757% -50 - C4 -3PX0 17.8 ?
24 PsiBlast_CBE 88.4557% -48 - C4 -4DS4 17.4 ?
20 PsiBlast_PDB 88.4457% -49 - C4 -4DQI 17.8 ?
61 PsiBlast_CBE 88.4357% -50 - C4 -3PV8 17.0 ?
55 PsiBlast_CBE 88.3457% -47 - C4 -3PX6 16.3 ?
17 PsiBlast_PDB 88.3257% -52 - C4 -4DQS 12.3 ?
21 PsiBlast_CBE 86.7557% -50 - C4 -4DS5 11.5 ?
33 PsiBlast_CBE 86.6257% -51 - C4 -4F8R 15.0 ?
23 PsiBlast_CBE 86.3857% -49 - C4 -4DS4 11.5 ?
59 PsiBlast_CBE 86.3357% -50 - C4 -3PX0 16.7 ?
49 PsiBlast_CBE 84.8357% -49 - C4 -4DSE 11.4 ?
47 PsiBlast_CBE 84.6857% -48 - C4 -4DSF 11.4 ?
57 PsiBlast_CBE 84.0557% -52 - C4 -3PX4 13.3 ?