@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U2G1: (2017-12-22 )
MKLVLLRHGESEANFENYWTGWLDVALTEKGKEQAAVAGQKMLEAGLQFDAVYTSVLKRAILTGQVALEEMGQLWLPIIKTWRLNERHYGDLVGKNKDKMKEIYGKDQVKTWRRGYTEVPPLTAENRFDRRYDHLDPHLIPYGESLEMTVNRIIPLWQDHLAPKLKDRQDLLVVGHGNSIRALTKYLEDVPEDQMDTIDIPNAQPIQYTLADDLTILDKKIL

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VO3_A_2(1E59)
GPMA_ECOLI
[Raw transfer]



DG2_A_3(3FDZ)
GPMA_BURP1
[Raw transfer]



DG2_A_4(2H4Z)
PMGE_HUMAN
[Raw transfer]



BHC_H_8(1BQ4)
PMG1_YEAST
[Raw transfer]



3PG_A_5(3GP5)
GPMA_BURP1
[Raw transfer]



DG2_A_4(2H4Z)
PMGE_HUMAN
[Raw transfer]



3PG_B_9(3GP5)
GPMA_BURP1
[Raw transfer]



DG2_B_3(2H4Z)
PMGE_HUMAN
[Raw transfer]



IHP_J_10(1BQ3)
PMG1_YEAST
[Raw transfer]



3PG_B_4(2A9J)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H4X)
PMGE_HUMAN
[Raw transfer]



IHP_I_9(1BQ3)
PMG1_YEAST
[Raw transfer]



TLA_C_7(5UM0)
GPMA_NEIG2
[Raw transfer]



3PG_A_5(2F90)
PMGE_HUMAN
[Raw transfer]



3PG_B_6(2F90)
PMGE_HUMAN
[Raw transfer]



TLA_C_7(5UM0)
GPMA_NEIG2
[Raw transfer]



CIT_A_4(1YFK)
PGAM1_HUMAN
[Raw transfer]



TLA_A_5(5UM0)
GPMA_NEIG2
[Raw transfer]



TLA_D_8(5UM0)
GPMA_NEIG2
[Raw transfer]



TLA_D_8(5UM0)
GPMA_NEIG2
[Raw transfer]



GOL_B_10(3GW8)
GPMA_BURP1
[Raw transfer]



GOL_D_7(1RII)
GPMA_MYCTU
[Raw transfer]



CIT_B_5(1YFK)
PGAM1_HUMAN
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_A_4(3GW8)
GPMA_BURP1
[Raw transfer]



GOL_B_6(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_B_6(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



TLA_B_6(5UM0)
GPMA_NEIG2
[Raw transfer]



3PG_J_10(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_J_10(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]
110 HHSearch 90.4845% 0 - C- -3GP3 - GPMA_BURP1 -
105 HHSearch 87.9743% 0 - C- -1YJX - PGAM1_HUMAN -
13 PsiBlast_PDB 87.2345% 0 - C- -3GP3 - GPMA_BURP1 -
57 PsiBlast_CBE 87.1041% 0 - C- -1YJX - PGAM1_HUMAN -
56 PsiBlast_CBE 87.1041% 0 - C- -1YJX - PGAM1_HUMAN -
55 PsiBlast_CBE 87.1041% 0 - C- -1YJX - PGAM1_HUMAN -
54 PsiBlast_CBE 87.1041% 0 - C- -1YJX - PGAM1_HUMAN -
53 PsiBlast_CBE 87.1041% 0 - C- -1YJX - PGAM1_HUMAN -
52 PsiBlast_CBE 87.1041% 0 - C- -1YJX - PGAM1_HUMAN -
51 PsiBlast_CBE 87.1041% 0 - C- -1YJX - PGAM1_HUMAN -
47 PsiBlast_CBE 87.1041% 0 - C- -1YJX - PGAM1_HUMAN -
19 PsiBlast_PDB 87.1041% 0 - C- -1YJX - PGAM1_HUMAN -
22 PsiBlast_CBE 82.3547% 9 - C1 -5UM0 2.5 GPMA_NEIG2
101 HHSearch 82.2447% 6 - C1 -5UM0 2.5 GPMA_NEIG2
23 PsiBlast_CBE 81.6547% 9 - C1 -5UM0 1.8 GPMA_NEIG2
1 PsiBlast_PDB 81.5747% 8 - C1 -5UM0 2.8 GPMA_NEIG2
115 HHSearch 80.8546% -30 - C- -3D8H - ? -
100 HHSearch 80.4347% 5 - C1 -5UM0 2.9 GPMA_NEIG2
102 HHSearch 80.2144% -4 - C- -3KKK - ? -
117 HHSearch 80.0038% -16 - C1 -2H4Z 6.4 PMGE_HUMAN
21 PsiBlast_CBE 79.5747% 8 - C1 -5UM0 2.9 GPMA_NEIG2
79 PsiBlast_CBE 79.3041% -15 - C1 -1RII 2.4 GPMA_MYCTU
8 PsiBlast_PDB 79.0941% 4 - C1 -1BQ3 2.8 PMG1_YEAST
63 PsiBlast_CBE 79.0540% -13 - C1 -2H4Z 5.8 PMGE_HUMAN
25 PsiBlast_CBE 78.9641% 8 - C1 -1QHF 3.0 PMG1_YEAST
66 PsiBlast_CBE 78.4040% -16 - C1 -2H4X 4.0 PMGE_HUMAN
108 HHSearch 77.9639% -14 - C1 -1RII 2.4 GPMA_MYCTU
76 PsiBlast_CBE 77.8441% -12 - C1 -1RII 2.4 GPMA_MYCTU
64 PsiBlast_CBE 77.8240% -16 - C1 -2H4Z 6.4 PMGE_HUMAN
18 PsiBlast_PDB 77.4441% 9 - C1 -1YFK 3.2 PGAM1_HUMAN
78 PsiBlast_CBE 77.4241% -11 * C1 *1RII 2.4 GPMA_MYCTU
35 PsiBlast_CBE 77.4041% 7 - C1 -1BQ4 4.2 PMG1_YEAST
58 PsiBlast_CBE 77.2141% 7 - C1 -1YFK 2.5 PGAM1_HUMAN
109 HHSearch 77.1839% -12 - C1 -1RII 2.4 GPMA_MYCTU
2 PsiBlast_PDB 77.1745% 13 - C1 -1E59 5.3 GPMA_ECOLI
68 PsiBlast_CBE 77.0840% -11 - C1 -2F90 4.0 PMGE_HUMAN
67 PsiBlast_CBE 76.9340% -14 - C1 -2F90 3.9 PMGE_HUMAN
17 PsiBlast_PDB 76.6943% 8 - C1 -4EMB 3.6 GPMA_BORBU
69 PsiBlast_CBE 76.6240% -12 - C1 -2A9J 4.2 PMGE_HUMAN
119 HHSearch 76.3743% -1 - C1 -4EMB 3.6 GPMA_BORBU
104 HHSearch 76.1441% 9 - C1 -1QHF 3.0 PMG1_YEAST
38 PsiBlast_CBE 75.5841% 10 - C1 -1BQ3 3.0 PMG1_YEAST
6 PsiBlast_PDB 75.4341% 10 - C1 -1QHF 3.5 PMG1_YEAST
14 PsiBlast_PDB 73.7545% -3 - C1 -3GP5 4.4 GPMA_BURP1
15 PsiBlast_PDB 73.5545% -4 - C1 -3GW8 3.8 GPMA_BURP1
40 PsiBlast_CBE 73.1445% -3 - C1 -3GP5 4.8 GPMA_BURP1
12 PsiBlast_PDB 71.6245% -4 - C1 -3FDZ 5.4 GPMA_BURP1
39 PsiBlast_CBE 71.4045% -4 - C1 -3GW8 2.6 GPMA_BURP1