@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U2U9: (2017-12-23 )
MIFSERMGEMTRLRAADIAAGYENKKIIENMSVTIPEGKITSLIGPNGSGKSTLLKSFTRILPVKSGKIIVNNSDISTYSSKELAKKIALLAQTSEHPTGMTVEEVVSYGRYPYQKLFSGMDTQDHEAIEWALDATGLAGFRMRDIATLSGGQTQRVWIAMALAQETDILILDEPTTFLDPAHQLEILQLLTEINQMKQTTILMSIHDINHASRFSDYLLAMKNGKLITEGTPEEVITKECMKKIFEIDATIVTLPRTNKPVFLTYDLLPKEQEDQL

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ANP_B_6(4PL0)
MCJD_ECOLX
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_C_12(1G9X)
LIVG_METJA
[Raw transfer]



ADP_B_10(1G9X)
LIVG_METJA
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
1 PsiBlast_PDB 80.5532% -65 - C1 -4G1U - HMUV_YERPE -
28 PsiBlast_CBE 77.4231%-119 - C1 -3TUI - METN_ECOLI -
12 PsiBlast_PDB 75.3631%-122 - C1 -3TUI - METN_ECOLI -
27 PsiBlast_CBE 73.9531%-117 - C1 -3TUI - METN_ECOLI -
13 PsiBlast_PDB 73.7231%-125 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 73.5531%-120 - C1 -3TUZ - METN_ECOLI -
11 PsiBlast_PDB 73.4931%-126 - C1 -3DHW - METN_ECOLI -
23 PsiBlast_CBE 73.4831%-126 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 72.0031%-120 - C1 -3TUZ - METN_ECOLI -
14 PsiBlast_PDB 70.7731%-125 - C1 -3TUJ - METN_ECOLI -
26 PsiBlast_CBE 70.4831%-125 - C1 -3TUI - METN_ECOLI -
53 HHSearch 67.1926%-118 * C1 *4YER - ? -
54 HHSearch 66.3222%-126 - C1 -3RLF - MALK_ECOLI -
43 PsiBlast_CBE 64.9731% -36 - C1 -1B0U - HISP_SALTY -
20 PsiBlast_PDB 64.9329% -20 - C1 -2OLK 4.6 ?
29 PsiBlast_CBE 64.8331% -62 - C1 -4HLU - ECFA1_THEMA -
2 PsiBlast_PDB 64.6033% -24 - C1 -3GFO - ECFA3_CLOP1 -
19 PsiBlast_PDB 62.9229% -28 - C1 -2OLJ 4.3 ?
55 HHSearch 62.6822%-122 - C1 -2AWN - MALK_ECOLI -
36 PsiBlast_CBE 61.1831% -26 - C1 -1G6H - LIVG_METJA -
34 PsiBlast_CBE 58.6831% -26 - C1 -1G9X 4.7 LIVG_METJA
33 PsiBlast_CBE 58.0331% -20 - C1 -1G9X 5.4 LIVG_METJA
22 PsiBlast_CBE 55.7531% -8 - C1 -5X40 6.2 CBIO_RHOCB
10 PsiBlast_PDB 53.1431% -12 - C1 -5X40 6.0 CBIO_RHOCB