@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U309: (2017-12-24 )
MMNKSRIRILDIFMAIILVVGIGIFSYPFVEDSLNDFLAQQMIIHYQKQASNKNSEEIKKQQEKMTKKNQQLAEQNVSPGIGSFNQAVDAKALKDLPSNAFFMEHMLGVIEIPKINVSLPIFDQTTEIFLQKGTSLLEESSYPTGGKNTHAVLSGHRGLPEAKLFTDLPKLKKGDQFFIQINGKTLAYQVEKIQVVLPDEVDSLGIQKGRDLVTLLTCTPYMVNTHRLLVTGHRIPYQAKEAKKAIQGIDQWKKWKFFIWFIGILLGSIGLVWLLIAYLDSLAIAKRNYPLSFYVKNTNGRPIEGMVFSVKTLNGKHYITREKVPFVKASDEYGLVRFSDLKGRNYRLQHEELLLKIHVKHKHSKQFSMKLKKGRYKLRKEKEVYYLIEKE

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_7(2W1J)
?
[Raw transfer]




ETM_B_8(3TBE)
?
[Raw transfer]




ETM_C_12(3TBE)
?
[Raw transfer]




ALA_A_3(2WTS)
?
[Raw transfer]




ETM_E_16(3TBE)
?
[Raw transfer]




ETM_F_17(3TBE)
?
[Raw transfer]




ETM_D_14(3TBE)
?
[Raw transfer]




GOL_A_5(2W1J)
?
[Raw transfer]




GLY_A_2(5GO5)
?
[Raw transfer]




GOL_A_5(2W1J)
?
[Raw transfer]




GOL_A_5(2W1J)
?
[Raw transfer]




ETM_A_7(3TBE)
?
[Raw transfer]




48 HHSearch 82.8939%-104 - C- -4G1J - ? -
50 HHSearch 82.3840%-107 - C4 -3G66 - ? -
45 HHSearch 81.3641% -87 - C4 -2W1J 3.3 ?
32 Fugue 80.7442% -90 - C4 -2W1J 2.3 ?
25 PsiBlast_CBE 79.8851%-133 - C4 -3TBE 2.9 ?
51 HHSearch 79.8140%-104 - C4 -3G69 - ? -
46 HHSearch 79.7139% -84 - C4 -2WTS - ? -
26 PsiBlast_CBE 79.4551%-127 - C4 -3TBE 2.9 ?
6 PsiBlast_PDB 79.1551%-132 - C4 -3RBI - ? -
24 PsiBlast_CBE 79.0351%-137 - C4 -3TBE 3.1 ?
27 PsiBlast_CBE 78.8651%-129 - C4 -3TBE 3.1 ?
28 PsiBlast_CBE 78.7951%-140 - C4 -3TBE 3.0 ?
47 HHSearch 78.6441% -84 - C4 -4D7W - ? -
8 PsiBlast_PDB 78.5751%-121 - C4 -3TB7 - ? -
1 PsiBlast_PDB 78.2057%-140 - C4 -3RE9 - ? -
7 PsiBlast_PDB 78.1651%-128 - C4 -3RBK - ? -
3 PsiBlast_PDB 77.8149%-144 - C4 -3G66 - ? -
23 PsiBlast_CBE 77.7049%-147 - C4 -3G66 - ? -
4 PsiBlast_PDB 77.4249%-147 - C4 -3G69 - ? -
5 PsiBlast_PDB 77.2851%-131 - C4 -4G1J - ? -
9 PsiBlast_PDB 76.2251%-128 - C4 -3TBE 3.1 ?
11 PsiBlast_PDB 75.7454%-146 - C4 -2WTS 2.4 ?
2 PsiBlast_PDB 75.6955%-140 - C4 -2W1J 3.4 ?
21 PsiBlast_CBE 75.3155%-145 - C4 -2W1J 2.5 ?