@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U3V2: (2017-12-25 )
MAKKTVKDIDLKDKKVLVRVDFNVPLKDGVITDDTRIKAALPTINYVLEQGGKAILFSHLGRVKTEEDKEGKSLAPVAKRLGELLGKEVTFVPETRGEQLEEAIRNMNDGDVVVFENTRFEDIDGKKESKNDTELGKYWASLGDVFVNDAFGTAHRAHASNVGIASTGIPTVAGFLMEKEIKFIGEAVEEPKRPMIAILGGAKVSDKIGVIENLIPKADKILIGGGMTYTFYEAKGIKIGNSLVEADKVELAKELIEKAGDKLVLPIDNVCAPEFSNDVETQVIEGDIPDGLMALDIGPASVKLFADTLQGAKTVVWNGPMGVFEMSNFAKGTIGVCEAIANLEGATTIIGGGDSAAAAEQLGFADKFTHISTGGGASLELLEGKELPGLAAINDK

Atome Classification :

(59 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(2X13)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(1VJD)
PGK1_PIG
[Raw transfer]




ADP_A_3(2XE7)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(2X15)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ADP_A_5(2WZD)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(4AXX)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]




ANP_A_4(3ZLB)
PGK_STRP2
[Raw transfer]




ADP_A_5(2WZC)
PGK1_HUMAN
[Raw transfer]




ADP_A_6(3ZOZ)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]




ATP_A_3(2PAA)
PGK2_MOUSE
[Raw transfer]




ACP_A_4(2X14)
PGK1_HUMAN
[Raw transfer]




BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]




BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]




ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]




LA8_D_8(2Y3I)
PGK1_HUMAN
[Raw transfer]




LA8_A_5(2Y3I)
PGK1_HUMAN
[Raw transfer]




ACP_A_4(1KF0)
PGK1_PIG
[Raw transfer]




LA8_A_4(2YBE)
PGK1_HUMAN
[Raw transfer]




ADP_A_2(2ZGV)
PGK1_HUMAN
[Raw transfer]




ACP_A_3(2XE8)
PGK1_HUMAN
[Raw transfer]




ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]




AMP_A_2(1HDI)
PGK1_PIG
[Raw transfer]




ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]




ADP_B_6(3C3A)
PGK1_HUMAN
[Raw transfer]




CDP_A_5(3C3C)
PGK1_HUMAN
[Raw transfer]




GOL_A_7(3ZLB)
PGK_STRP2
[Raw transfer]




FMT_B_11(3Q3V)
PGK_CAMJE
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




ATP_A_3(3PGK)
PGK_YEAST
[Raw transfer]




ATP_A_3(3PGK)
PGK_YEAST
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




CDF_B_5(3C3B)
PGK1_HUMAN
[Raw transfer]




3PG_A_4(1VPE)
PGKT_THEMA
[Raw transfer]




3PG_B_4(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_2(2XE6)
PGK1_HUMAN
[Raw transfer]




3PG_B_6(3C3C)
PGK1_HUMAN
[Raw transfer]




3PG_A_3(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_2(2P9T)
PGK2_MOUSE
[Raw transfer]




3PG_A_4(3C3A)
PGK1_HUMAN
[Raw transfer]




3PG_B_6(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_B_4(2PAA)
PGK2_MOUSE
[Raw transfer]




TZN_A_2(4O33)
PGK1_HUMAN
[Raw transfer]




TZN_A_2(4O3F)
PGK1_MOUSE
[Raw transfer]




3PG_A_3(1QPG)
PGK_YEAST
[Raw transfer]




1 PsiBlast_PDB 84.8869% - - C- -4DG5 - PGK_STAAR -
73 HHSearch 83.5162% -48 - C7 -1VPE 8.2 PGKT_THEMA
70 HHSearch 82.9768% - - C- -4DG5 - PGK_STAAR -
3 PsiBlast_PDB 82.5860% -50 - C7 -1VPE 8.2 PGKT_THEMA
2 PsiBlast_PDB 81.5668% -12 - C7 -3ZLB 3.8 PGK_STRP2
68 HHSearch 80.8755% -61 - C7 -1PHP 7.7 PGK_GEOSE
4 PsiBlast_PDB 80.5554% -61 - C7 -1PHP 7.7 PGK_GEOSE
69 HHSearch 79.2768% 12 - C7 -3ZLB 7.7 PGK_STRP2
71 HHSearch 75.0149% -15 - C7 -3Q3V 3.3 PGK_CAMJE
72 HHSearch 74.7049% -6 - C7 -3Q3V 3.2 PGK_CAMJE
81 HHSearch 74.0850% -4 - C7 -16PK 7.0 PGKC_TRYBB
79 HHSearch 73.8351% 17 - C7 -1QPG 8.5 PGK_YEAST
7 PsiBlast_PDB 73.7651% -22 - C7 -1V6S - PGK_THET8 -
43 PsiBlast_CBE 73.6747% -60 - C7 -4FEY 6.2 PGK_FRATT
24 PsiBlast_CBE 73.6551% -20 - C7 -1V6S - PGK_THET8 -
15 PsiBlast_PDB 73.5948% 3 - C7 -3Q3V 3.2 PGK_CAMJE
9 PsiBlast_PDB 73.3449% 15 - C7 -1QPG 8.5 PGK_YEAST
8 PsiBlast_PDB 72.5150% -24 - C7 -2IE8 - ? -
74 HHSearch 72.2151% 18 - C7 -1V6S - PGK_THET8 -
44 PsiBlast_CBE 72.1944% 15 - C7 -4O33 6.4 PGK1_HUMAN
36 PsiBlast_CBE 71.9444% 11 - C7 -2XE6 5.6 PGK1_HUMAN
12 PsiBlast_PDB 71.6346% 11 - C7 -2P9T 4.9 PGK2_MOUSE
6 PsiBlast_PDB 71.5947% 13 - C7 -16PK 7.0 PGKC_TRYBB
51 PsiBlast_CBE 71.5242% 4 - C7 -1HDI 5.8 PGK1_PIG
16 PsiBlast_PDB 71.1044% 15 - C7 -2ZGV 5.5 PGK1_HUMAN
13 PsiBlast_PDB 71.0646% 10 - C7 -2PAA 5.9 PGK2_MOUSE
49 PsiBlast_CBE 70.9644% 22 - C7 -4O3F 6.8 PGK1_MOUSE
58 PsiBlast_CBE 70.8737% -38 - C7 -2CUN 2.5 PGK_PYRHO
34 PsiBlast_CBE 70.7844% 13 - C7 -2XE8 4.4 PGK1_HUMAN
47 PsiBlast_CBE 70.5644% 10 - C7 -1VJD 6.0 PGK1_PIG
17 PsiBlast_PDB 70.3944% 10 - C7 -3C39 5.3 PGK1_HUMAN
20 PsiBlast_PDB 70.3044% 11 - C7 -3C3C 4.3 PGK1_HUMAN
28 PsiBlast_CBE 70.2844% 12 - C7 -3C3B 4.0 PGK1_HUMAN
42 PsiBlast_CBE 70.1044% 12 - C7 -2Y3I 6.6 PGK1_HUMAN
50 PsiBlast_CBE 70.0244% 10 - C7 -1KF0 5.4 PGK1_PIG
57 PsiBlast_CBE 69.9537% -37 - C7 -2CUN 2.8 PGK_PYRHO
18 PsiBlast_PDB 69.7444% 8 - C7 -3C3A 3.8 PGK1_HUMAN
48 PsiBlast_CBE 69.6244% 15 - C7 -1VJC 5.9 PGK1_PIG
35 PsiBlast_CBE 69.5044% 18 - C7 -2XE7 6.3 PGK1_HUMAN
33 PsiBlast_CBE 69.3644% 14 - C7 -2YBE 8.0 PGK1_HUMAN
27 PsiBlast_CBE 69.3044% 12 - C7 -3C3C 4.7 PGK1_HUMAN
37 PsiBlast_CBE 69.2744% 14 - C7 -2X15 7.7 PGK1_HUMAN
30 PsiBlast_CBE 69.2344% 12 - C7 -3C39 5.6 PGK1_HUMAN
41 PsiBlast_CBE 69.2244% 13 - C7 -2Y3I 6.8 PGK1_HUMAN
29 PsiBlast_CBE 69.1844% 7 - C7 -3C3A 5.4 PGK1_HUMAN
25 PsiBlast_CBE 69.1546% 16 - C7 -2PAA 3.7 PGK2_MOUSE
31 PsiBlast_CBE 69.1044% 10 - C7 -4AXX 7.7 PGK1_HUMAN
39 PsiBlast_CBE 69.0144% 7 - C7 -2WZC 8.1 PGK1_HUMAN
40 PsiBlast_CBE 68.9644% 5 - C7 -2WZB 8.5 PGK1_HUMAN
38 PsiBlast_CBE 68.9644% 14 - C7 -2X13 7.4 PGK1_HUMAN
78 HHSearch 68.8447% 23 - C7 -2WZB 8.5 PGK1_HUMAN
32 PsiBlast_CBE 68.7344% 9 - C7 -3ZOZ 7.9 PGK1_HUMAN
45 PsiBlast_CBE 68.5744% 7 - C7 -2X14 8.4 PGK1_HUMAN
46 PsiBlast_CBE 68.3844% 8 - C7 -2WZD 6.9 PGK1_HUMAN
77 HHSearch 68.3446% 29 * C7 *1VJC 5.9 PGK1_PIG
75 HHSearch 68.2649% 15 - C7 -4FEY 6.2 PGK_FRATT
80 HHSearch 67.5950% 11 - C7 -3PGK 2.9 PGK_YEAST
10 PsiBlast_PDB 66.0649% 5 - C7 -3PGK 2.9 PGK_YEAST
53 PsiBlast_CBE 62.9649% 5 - C7 -1FW8 2.7 PGK_YEAST