@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U3V4: (2017-12-25 )
MGRFKSTLDVKCPTKEIAMLDEIKMIESVAPDIIEVLQERYKILRNIYWMQPIGRRSLSESMGITERVLRTETDLLKNLNLIDTSKSGMTLTTKGEEVYQSLENFMDQLLGTHQTEQQLAEYFGNQRCIVVSGNSEEQTKVADAFGEALSEALDRLLPEGENIIAVMGGTTMAVVAEQLSNLENKKRHNLFVPARGGIGEAITVQANSVSARMAAKANGNHRALYVPEQLSLATYNSLLNEPSIQEVLNLISEANCVIHSIGRALHMAARRKMTEKELVMLKQANAVAESFGYFFNEKGEVVYKVPRIGIELQDLEKVPIIMAIAGGKSKAKAIRAYMKNAPKQTWLITDEAAANEILKGVTL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

F6P_A_3(3BXH)
CGGR_BACSU
[Raw transfer]



FBP_A_3(3BXF)
CGGR_BACSU
[Raw transfer]



F6P_B_4(3BXH)
CGGR_BACSU
[Raw transfer]



BG6_B_4(3BXG)
CGGR_BACSU
[Raw transfer]



BG6_A_3(3BXG)
CGGR_BACSU
[Raw transfer]



13P_B_8(3BXF)
CGGR_BACSU
[Raw transfer]



13P_A_3(3BXE)
CGGR_BACSU
[Raw transfer]
1 PsiBlast_PDB 93.5171%-124 - C3 -2O0M - ? -
25 HHSearch 82.8173% -20 - C3 -2O0M - ? -
22 PsiBlast_CBE 79.5544%-104 - C3 -3BXG 5.0 CGGR_BACSU
21 PsiBlast_CBE 79.3844%-102 - C3 -3BXH 5.8 CGGR_BACSU
2 PsiBlast_PDB 79.2744%-107 - C3 -3BXE 3.4 CGGR_BACSU
3 PsiBlast_PDB 79.2344%-110 - C3 -3BXF 5.7 CGGR_BACSU
4 PsiBlast_PDB 78.7444%-103 - C3 -3BXG 4.5 CGGR_BACSU
5 PsiBlast_PDB 78.6744%-107 - C3 -3BXH 4.5 CGGR_BACSU
24 PsiBlast_CBE 78.1544%-103 - C3 -3BXE - CGGR_BACSU -
23 PsiBlast_CBE 77.8044%-105 - C3 -3BXF 3.8 CGGR_BACSU
32 HHSearch 72.8244% -58 - C3 -3BXG - CGGR_BACSU -
33 HHSearch 70.1244% -62 - C3 -2OKG - CGGR_BACSU -
46 Fugue 69.9366% 27 - C3 -2O0M - ? -
26 HHSearch 65.4525% -66 - C3 -4L5I - LSRR_ECOLI -
48 Fugue 64.2916% -63 - C3 -2W48 - SORC_KLEPN -
27 HHSearch 62.4719% -53 - C3 -2W48 - SORC_KLEPN -
28 HHSearch 61.6319% -62 - C3 -2W48 - SORC_KLEPN -
12 PsiBlast_PDB 59.6627% -35 - C3 -4L51 - LSRR_ECOLI -
6 PsiBlast_PDB 59.5527% -31 - C3 -4L5I - LSRR_ECOLI -
11 PsiBlast_PDB 59.5227% -28 - C3 -4L50 - LSRR_ECOLI -