@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U464: (2017-12-26 )
MKLMWHYTMRYKKFLFFNFICVFGFILIELRLPTILARMIDVGIRNDDFDYVKQQGIFMIVITVIGIILNILLGYFGSRITTNIVADIRDDLFEKIQSYSHQEYENLGVSSLITRTTNDAYQIMLFLQNILRIGFMAPMMFIVSLYMVMRTSVTLSLYVVGALPLLLLAVVAIAKVSEPLSKKQQKNLDKINSILRENLSGLRVIRAFVNEKFEEKRFAVVNENYASSSKSLFRLMAVAQPGFYFLFNIVMVLIIWSGAVQIDAGELRVGDLIAFIEYIFHALFSFMLFASVFMMYPRAAVSAGRIQEALDAKPSIVEDPNGISDTKTKGYIEFQNVTFAYPGHSQEPVIRNVSFTASPGETVAFIGSTGSGKSTLIQLIPRFYDVSEGKILIDGVDVRDYRLSKLRDKIGFIPQKALLFTGTIADNLRYGKEDATQEEMERAAEIAQASEFISRKPDGFNEHLSEGGSNFSGGQKQRLAIARAIIRRPEIYIFDDSFSALDYQTDAKLRARLKKETTESTVLIVAQRVGTIMHADKIIVLNEGEVVGMGTHRELLEKCPIYYDIAASQLSKEELA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(4Q4A)
?
[Raw transfer]



ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]



ATP_A_3(2IXE)
TAP1_RAT
[Raw transfer]



ANP_A_3(3QF4)
?
[Raw transfer]



ATP_A_2(2IXG)

[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
2 PsiBlast_PDB 85.7639%-138 - C1 -4Q4A 6.0 ?
1 PsiBlast_PDB 83.7339%-139 * C1 *3QF4 6.6 ?
121 HHSearch 81.6339% - - C1 -4Q4H - ? -
123 HHSearch 80.4832%-150 - C1 -3QF4 - Y288_THEMA -
3 PsiBlast_PDB 80.3839% - - C1 -4Q4H - ? -
4 PsiBlast_PDB 77.8340%-121 - C1 -4Q4J - ? -
124 HHSearch 75.7432% - - C1 -4Q4H - Y288_THEMA -
21 PsiBlast_CBE 70.1932% -50 - C1 -4Q4A - Y288_THEMA -
120 HHSearch 70.1128% - - C1 -3B5X - MSBA_VIBCH -
22 PsiBlast_CBE 69.9432% -48 - C1 -3QF4 - Y288_THEMA -
12 PsiBlast_PDB 69.5828% - - C1 -3B5X - MSBA_VIBCH -
122 HHSearch 66.6128% -83 - C1 -5MKK - ? -
118 HHSearch 65.4931% -46 - C1 -4A82 - Y1866_STAAM -
114 HHSearch 64.8427% -90 - C1 -3B60 - MSBA_SALTY -
131 HHSearch 61.8629% -46 - C1 -5MKK - ? -
18 PsiBlast_PDB 61.6627% - - C1 -3B5W - MSBA_ECOLI -
16 PsiBlast_PDB 61.5128% - - C1 -3B5Z 2.3 MSBA_SALTY
132 HHSearch 61.4425%-126 - C1 -5U1D - TAP2_HUMAN -
15 PsiBlast_PDB 61.3828% - - C1 -3B5Y - MSBA_SALTY -
24 PsiBlast_CBE 61.1932% -37 - C1 -2HYD 4.5 Y1866_STAAM