@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U4D9: (2017-12-26 )
MSEYREIATPSRTKEILLKHGFSFKKSLGQNFLTEPNILRKIVETAQIDEHTNVIEVGPGIGALTEQLAKHAKQVVAFEIDDRLIPVLADTMQPYDNVTIVHQDILKTDLSTAVRETFHEELPLKVVANLPYYITTPIMMHFLESDLVVDELVVMMQKEVADRISAEPGTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFRLTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNAMSENMQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADN_A_2(3FUU)
RSMA_THET8
[Raw transfer]



SAH_A_2(3GRR)
RSMA_METJA
[Raw transfer]



MTA_A_2(3FUW)
RSMA_THET8
[Raw transfer]



MTA_A_4(3FUX)
RSMA_THET8
[Raw transfer]



ADN_A_2(3GRV)
RSMA_METJA
[Raw transfer]



MTA_C_6(3FUX)
RSMA_THET8
[Raw transfer]



MTA_C_6(3FUX)
RSMA_THET8
[Raw transfer]



MTA_B_5(3FUX)
RSMA_THET8
[Raw transfer]



AMP_A_2(3GRU)
RSMA_METJA
[Raw transfer]



AMP_A_2(3GRU)
RSMA_METJA
[Raw transfer]
38 HHSearch 95.4239%-135 - C1 -3FUX 6.2 RSMA_THET8
37 HHSearch 93.7639%-131 - C- -3FUT - RSMA_THET8 -
36 HHSearch 90.8337%-115 - C1 -3GRU 5.4 RSMA_METJA
40 HHSearch 89.3436%-115 - C1 -3FYC - RSMA_METJA -
34 HHSearch 88.4234%-144 - C1 -1QYR - RSMA_ECOLI -
3 PsiBlast_PDB 82.4137% -37 - C1 -3FUX 6.2 RSMA_THET8
13 PsiBlast_PDB 82.3038%-134 - C1 -3GRY - RSMA_METJA -
22 PsiBlast_CBE 82.1837% -37 - C1 -3FUX 6.2 RSMA_THET8
10 PsiBlast_PDB 81.7938%-129 - C1 -3GRR 8.3 RSMA_METJA
12 PsiBlast_PDB 81.7338%-127 - C1 -3GRV 5.4 RSMA_METJA
11 PsiBlast_PDB 81.6038%-129 - C1 -3GRU 5.4 RSMA_METJA
21 PsiBlast_CBE 81.5437% -39 - C1 -3FUX 6.2 RSMA_THET8
14 PsiBlast_PDB 81.1937%-132 - C1 -3FYC - RSMA_METJA -
15 PsiBlast_PDB 81.1437%-129 - C1 -3FYD - RSMA_METJA -
1 PsiBlast_PDB 79.8937% -34 - C1 -3FUU 6.4 RSMA_THET8
4 PsiBlast_PDB 79.1237% -37 - C- -3FUT - RSMA_THET8 -
2 PsiBlast_PDB 78.9737% -33 - C1 -3FUW 6.6 RSMA_THET8
45 HHSearch 76.2525%-140 - C1 -1QAO - ERM_BACIU -
44 HHSearch 75.9725%-143 - C1 -1QAM - ERM_BACIU -
43 HHSearch 75.1829% -39 * C1 *1ZQ9 - DIM1_HUMAN -