@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U501: (2017-12-28 )
MFYMENCIFCKIINQEIPSYKIYEDDKVYAFLDISQATKGHTLVVPKRHVADIFEYDPELAGEVFSRVPKIAQALEKAFPEMKGLNILNNNRELAYQSVFHSHIHLVPRYSKEDDFSIHFVNHQDSYGSEELKAIQETIVKQVSCDD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5GP_B_6(4EGU)
?
[Raw transfer]




5GP_A_3(3OXK)
HIT_ENTHI
[Raw transfer]




AMP_A_3(3OMF)
HIT_ENTHI
[Raw transfer]




UNL_B_6(3LB5)
?
[Raw transfer]




UNL_A_5(3LB5)
?
[Raw transfer]




UNL_D_8(3LB5)
?
[Raw transfer]




EDO_A_6(3P0T)
?
[Raw transfer]




UNL_C_7(3LB5)
?
[Raw transfer]




EDO_A_7(3P0T)
?
[Raw transfer]




105 HHSearch 90.9953%-160 - C7 -3IMI - ? -
2 PsiBlast_PDB 89.1752%-133 - C7 -3L7X - ? -
1 PsiBlast_PDB 88.2954%-127 - C7 -1Y23 - HIT_BACSU -
106 HHSearch 88.0553%-133 - C7 -3L7X - ? -
3 PsiBlast_PDB 87.0253%-156 - C7 -3IMI - ? -
111 HHSearch 82.6837%-135 - C7 -3LB5 3.0 ?
13 PsiBlast_PDB 79.8635%-131 - C7 -3P0T - ? -
31 PsiBlast_CBE 78.3335%-133 - C7 -3P0T - ? -
109 HHSearch 78.3031%-136 - C7 -2EO4 - ? -
107 HHSearch 77.2534%-138 - C7 -3P0T 2.9 ?
4 PsiBlast_PDB 73.9842%-145 - C7 -3LB5 2.6 ?
7 PsiBlast_PDB 73.8337%-163 - C7 -2EO4 - ? -
6 PsiBlast_PDB 73.8238%-132 - C7 -3KSV - ? -
108 HHSearch 72.9332% -67 - C7 -3O0M - ? -
5 PsiBlast_PDB 71.9832% -89 - C7 -3O0M - ? -
27 PsiBlast_CBE 71.5042%-140 - C7 -3LB5 2.8 ?
28 PsiBlast_CBE 71.3132% -93 - C7 -3O0M - ? -
26 PsiBlast_CBE 71.1042%-125 - C7 -3LB5 2.8 ?
104 HHSearch 71.0333%-129 - C7 -3KSV - ? -
118 HHSearch 70.9232%-165 * C7 *4ZGL - YHIT_HELPY -