@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U577: (2017-12-28 )
MTQEQQHQVEDLNDQMLVRRQKMEQLREDGIDPFGKRFERTHNSEELHELFDPRTKEELAEMGLTASVAGRMMTRRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAYEVFKHADLGDFFGVTGQIMKTDTGEVSIKASEITILSKALRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETPVLHNEAGGAAARPFITHHNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHMVDAIKEQTGVDFWQEMTLEEALALAEKHNVEVTEAMGVGHVINEFFETFVEETLTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRERFEAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LAD_B_2(1E1T)
SYK2_ECOLI
[Raw transfer]




LAD_A_2(4UP7)
?
[Raw transfer]




KAA_C_7(3A5Y)
EPMA_ECOLI
[Raw transfer]




KAA_B_6(3A5Y)
EPMA_ECOLI
[Raw transfer]




ATP_A_3(1E24)
SYK2_ECOLI
[Raw transfer]




ACP_A_3(1E22)
SYK2_ECOLI
[Raw transfer]




AMP_A_3(3G1Z)
EPMA_SALTY
[Raw transfer]




LAD_A_2(4UP7)
?
[Raw transfer]




GOL_B_9(1E1T)
SYK2_ECOLI
[Raw transfer]




ANP_A_2(4UPA)
?
[Raw transfer]




ATP_A_2(4UP9)
?
[Raw transfer]




GOL_B_11(1E1O)
SYK2_ECOLI
[Raw transfer]




KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]




KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]




LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]




LYS_A_3(4EX5)
SYK_BURTA
[Raw transfer]




LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]




KRS_B_8(4YCU)
SYK_HUMAN
[Raw transfer]




LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]




LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]




LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]




LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]




24 PsiBlast_CBE 95.4470% -82 - C7 -3E9H - SYK_GEOSE -
102 HHSearch 95.3070% -81 - C7 -3E9H - SYK_GEOSE -
26 PsiBlast_CBE 95.3070% -81 - C7 -3E9H - SYK_GEOSE -
27 PsiBlast_CBE 95.2970% -83 - C7 -3A74 - SYK_GEOSE -
29 PsiBlast_CBE 95.0970% -82 - C7 -3A74 - SYK_GEOSE -
1 PsiBlast_PDB 95.0670% -81 - C7 -3E9H - SYK_GEOSE -
22 PsiBlast_CBE 94.5670% -84 - C7 -3E9I - SYK_GEOSE -
21 PsiBlast_CBE 94.5470% -83 - C7 -3E9I - SYK_GEOSE -
103 HHSearch 94.4470% -83 - C7 -3A74 - SYK_GEOSE -
3 PsiBlast_PDB 94.4470% -83 - C7 -3A74 - SYK_GEOSE -
28 PsiBlast_CBE 94.4370% -83 - C7 -3A74 - SYK_GEOSE -
25 PsiBlast_CBE 94.3270% -83 - C7 -3E9H - SYK_GEOSE -
2 PsiBlast_PDB 94.1470% -81 - C7 -3E9I - SYK_GEOSE -
23 PsiBlast_CBE 93.5770% -79 - C7 -3E9I - SYK_GEOSE -
94 HHSearch 78.6148% -38 - C7 -4EX5 3.1 SYK_BURTA
30 PsiBlast_CBE 78.1151% 1 - C7 -1LYL - SYK2_ECOLI -
11 PsiBlast_PDB 77.9548% -44 - C7 -4EX5 3.1 SYK_BURTA
6 PsiBlast_PDB 77.9051% 6 - C7 -1LYL - SYK2_ECOLI -
31 PsiBlast_CBE 77.7851% 3 - C7 -1LYL - SYK2_ECOLI -
32 PsiBlast_CBE 77.4648% -42 - C7 -4EX5 3.1 SYK_BURTA
8 PsiBlast_PDB 77.2351% 5 - C7 -1E1T 8.6 SYK2_ECOLI
7 PsiBlast_PDB 77.2351% 3 - C7 -1E1O 3.2 SYK2_ECOLI
9 PsiBlast_PDB 76.8251% 3 - C7 -1E22 6.8 SYK2_ECOLI
10 PsiBlast_PDB 76.6451% 4 - C7 -1E24 7.0 SYK2_ECOLI
93 HHSearch 76.5651% 2 - C7 -1E1O 3.2 SYK2_ECOLI
4 PsiBlast_PDB 76.4952% 3 - C7 -1BBU 2.7 SYK1_ECOLI
95 HHSearch 75.4352% 1 - C7 -1BBU 2.7 SYK1_ECOLI
104 HHSearch 69.7944% 16 - C7 -4UP7 7.5 ?
92 HHSearch 67.6341% 20 - C7 -4YCU 6.2 SYK_HUMAN
41 PsiBlast_CBE 65.8441% 31 - C7 -4YCU 6.5 SYK_HUMAN
16 PsiBlast_PDB 65.5341% 28 - C7 -4YCU 6.2 SYK_HUMAN
65 PsiBlast_CBE 52.0934% 42 - C7 -4UP7 6.6 ?
63 PsiBlast_CBE 51.6734% 51 - C7 -4UPA 6.0 ?
64 PsiBlast_CBE 50.0834% 54 - C7 -4UP9 5.5 ?