@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U5B5: (2017-12-28 )
MKKKVEVPMSKHYFDPRLKIFALNSNRPLAEKIAAAVGVELGKSSVTQFSDGEIQVNIEESIRGSHVYVIQSTSSPVNDNLMELLIMIDALKRASAKTINVVMPYYGYARQDRKARAREPITAKLVANMIQKAGATRMLTLDLHAVQIQGFFDIPVDHLMGAPLIANYFLEKGIKGDDVVVVSPDHGGVTRARKLAEFLKSPIAIIDKRRPKANVAEVMNIIGQVKGKTCVLIDDMIDTAGTITLAANALKEAGATSVYASCTHPVLSGPALQRIEDSAIERLVVTDSIYLPEDRKIDKIDEVSVGGLMGDAIKRIHENKPVSPLFETKNK

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_B_13(3DAH)
?
[Raw transfer]




AMP_B_13(3DAH)
?
[Raw transfer]




ABM_F_6(1DKU)
KPRS_BACSU
[Raw transfer]




AMP_B_12(2HCR)
PRPS1_HUMAN
[Raw transfer]




AMP_B_12(3DAH)
?
[Raw transfer]




AMP_B_12(3DAH)
?
[Raw transfer]




AMP_A_11(3DAH)
?
[Raw transfer]




AMP_A_11(2HCR)
PRPS1_HUMAN
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




ADP_B_6(3NAG)
KPRS_THEVO
[Raw transfer]




ADP_A_7(3LRT)
KPRS_THEVO
[Raw transfer]




62 HHSearch 90.6670%-167 - C8 -1DKR - KPRS_BACSU -
63 HHSearch 89.5170%-169 - C8 -1DKU 2.9 KPRS_BACSU
82 Fugue 88.9970%-167 - C8 -1DKU 2.9 KPRS_BACSU
1 PsiBlast_PDB 88.8469%-169 - C8 -1DKU 2.9 KPRS_BACSU
21 PsiBlast_CBE 88.4369%-170 - C8 -1DKU 3.1 KPRS_BACSU
6 PsiBlast_PDB 81.8546%-151 - C8 -4LYG - PRPS1_HUMAN -
10 PsiBlast_PDB 81.8046%-148 - C8 -3EFH - PRPS1_HUMAN -
4 PsiBlast_PDB 81.6547%-145 - C8 -4F8E - PRPS1_HUMAN -
8 PsiBlast_PDB 80.8546%-144 - C8 -2H06 - PRPS1_HUMAN -
15 PsiBlast_PDB 80.2946%-147 - C8 -4M0U - PRPS1_HUMAN -
5 PsiBlast_PDB 80.1947%-144 - C8 -2H08 - PRPS1_HUMAN -
13 PsiBlast_PDB 80.1046%-145 - C8 -4LZN - PRPS1_HUMAN -
9 PsiBlast_PDB 79.9746%-145 - C8 -2HCR 4.2 PRPS1_HUMAN
14 PsiBlast_PDB 79.9646%-143 - C8 -4M0P - PRPS1_HUMAN -
11 PsiBlast_PDB 79.9146%-147 - C8 -3S5J - PRPS1_HUMAN -
38 PsiBlast_CBE 79.6746%-145 - C8 -5T3O - ? -
7 PsiBlast_PDB 79.6546%-146 - C8 -2H07 - PRPS1_HUMAN -
31 PsiBlast_CBE 79.4846%-144 - C8 -2HCR 3.0 PRPS1_HUMAN
37 PsiBlast_CBE 79.4146%-155 - C8 -5T3O - ? -
64 HHSearch 79.4047%-151 - C8 -5T3O - ? -
23 PsiBlast_CBE 75.6155% -52 - C8 -3DAH 3.1 ?
70 HHSearch 75.1155% -50 - C8 -3DAH 3.1 ?
24 PsiBlast_CBE 74.0055% -55 - C8 -3DAH 3.7 ?
71 HHSearch 73.4955% -53 - C8 -3DAH 3.7 ?
2 PsiBlast_PDB 73.3055% -61 - C8 -3DAH 4.0 ?