@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U5B6: (2017-12-28 )
MTQLDARYAIILAAGKGTRMKSKLYKVLHPVSGKPMVEHIINRVSETKPDEVITIVGHGAEQVKAQLGERSKYALQAEQLGTGHAVLQAASFLEGKKGTTLVISGDTPLLTTETLNNLFEYHQGKNASATILTAQAENPTGYGRIIRDHIGIVEKIVEQKDATPEEALVQEINTGTYCFDNEALFDALSKVGTNNAQGEYYLTDIIEILKEEGHTVAAYQTDDFEESMGVNDRIALAKANEIMRKRINQMHMVNGVSFVDSATTYIDAGVEIGPDTLIEAGVQIQGNTVIGSDCVIGSHSKIVDSRIEDHVVIENSVIESSHVKKHADVGPYAHLRPKAEIGENVHIGNFVEVKNAQIGKGTKVGHLTYVGDATLGEEINVGCGVVFVNYDGKNKHHTTVGDHSFIGSSTNIIGPVEVAKNSSIAAGSTITDNIPEYALAIARARQVNKEGYAKKLPYLN

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_A_2(3D8V)
GLMU_MYCTU
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_B_11(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_B_14(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_B_14(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_7(4G3P)
?
[Raw transfer]




UD1_B_14(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_B_14(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_A_7(4G3Q)
GLMU_MYCTU
[Raw transfer]




UD1_A_7(4G3Q)
GLMU_MYCTU
[Raw transfer]




UD1_B_14(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_4(3DJ4)
GLMU_MYCTU
[Raw transfer]




UD1_B_13(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_A_6(4G87)
GLMU_MYCTU
[Raw transfer]




UD1_A_2(4G3S)
GLMU_MYCTU
[Raw transfer]




1SG_A_12(4KQL)
GLMU_HAEIN
[Raw transfer]




UD1_A_12(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_A_6(3SPT)
GLMU_MYCTU
[Raw transfer]




UD1_A_8(3ST8)
GLMU_MYCTU
[Raw transfer]




UD1_A_2(2V0I)
GLMU_HAEIN
[Raw transfer]




1SE_A_12(4KPX)
GLMU_HAEIN
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




1S8_A_2(4KNR)
GLMU_HAEIN
[Raw transfer]




0N5_A_6(4E1K)
GLMU_HAEIN
[Raw transfer]




1S9_A_2(4KNX)
GLMU_HAEIN
[Raw transfer]




ATP_A_2(4K6R)
GLMU_MYCTO
[Raw transfer]




LZR_A_2(2W0V)
GLMU_HAEIN
[Raw transfer]




LZS_A_2(2W0W)
GLMU_HAEIN
[Raw transfer]




URI_A_2(2V0L)
GLMU_HAEIN
[Raw transfer]




UDP_A_2(2V0K)
GLMU_HAEIN
[Raw transfer]




H2U_A_2(2V0J)
GLMU_HAEIN
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




POP_A_7(4G87)
GLMU_MYCTU
[Raw transfer]




POP_A_4(4G3S)
GLMU_MYCTU
[Raw transfer]




GN1_A_3(4HCQ)
GLMU_MYCTU
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




GN1_A_2(2QKX)
GLMU_MYCTU
[Raw transfer]




GN1_A_2(2QKX)
GLMU_MYCTU
[Raw transfer]




P21_A_2(2VD4)
GLMU_HAEIN
[Raw transfer]




PEG_A_4(2V0H)
GLMU_HAEIN
[Raw transfer]




22 PsiBlast_CBE 95.5854%-102 - C1 -1HM8 - GLMU_STRPN -
1 PsiBlast_PDB 94.9855%-107 - C1 -4AAW - GLMU_STRR6 -
4 PsiBlast_PDB 94.8154%-104 - C1 -1HM8 - GLMU_STRPN -
56 Fugue 94.7054%-101 - C1 -1HM9 8.8 GLMU_STRPN
2 PsiBlast_PDB 94.3955%-104 - C1 -4AC3 - GLMU_STRR6 -
7 PsiBlast_PDB 94.3354%-102 - C1 -1G97 9.2 GLMU_STRPN
6 PsiBlast_PDB 94.3154%-104 - C1 -1G95 - GLMU_STRPN -
3 PsiBlast_PDB 93.9754%-101 - C1 -1HM9 8.8 GLMU_STRPN
5 PsiBlast_PDB 93.1854%-105 - C1 -1HM0 - GLMU_STRPN -
21 PsiBlast_CBE 93.0854% -99 - C1 -1HM9 8.8 GLMU_STRPN
67 HHSearch 81.2953% -48 - C1 -4AC3 - GLMU_STRR6 -
68 HHSearch 79.4952% -41 - C1 -1HM9 7.7 GLMU_STRPN
34 PsiBlast_CBE 76.2842% -10 - C1 -4KPX 5.4 GLMU_HAEIN
33 PsiBlast_CBE 75.7742% -13 - C1 -4KPZ - GLMU_HAEIN -
32 PsiBlast_CBE 75.5242% -11 - C1 -4KQL 6.7 GLMU_HAEIN
37 PsiBlast_CBE 75.2542% -10 - C1 -4E1K 5.3 GLMU_HAEIN
36 PsiBlast_CBE 75.1942% -11 - C1 -4KNR 5.8 GLMU_HAEIN
39 PsiBlast_CBE 74.8342% -11 - C1 -2W0V 6.1 GLMU_HAEIN
43 PsiBlast_CBE 74.7942% -12 - C1 -2V0J 4.1 GLMU_HAEIN
41 PsiBlast_CBE 74.7742% -14 - C1 -2V0L 3.5 GLMU_HAEIN
35 PsiBlast_CBE 74.7642% -10 - C1 -4KNX 6.2 GLMU_HAEIN
28 PsiBlast_CBE 74.7642% -18 - C1 -2OI6 6.7 GLMU_ECOLI
38 PsiBlast_CBE 74.7542% -13 - C1 -2W0W 7.8 GLMU_HAEIN
69 HHSearch 74.6343% -19 - C1 -2OI6 8.4 GLMU_ECOLI
20 PsiBlast_PDB 74.5142% -17 - C1 -1HV9 6.5 GLMU_ECOLI
42 PsiBlast_CBE 74.4042% -12 - C1 -2V0K 3.2 GLMU_HAEIN
26 PsiBlast_CBE 74.0142% -16 - C1 -2OI7 6.3 GLMU_ECOLI
29 PsiBlast_CBE 74.0042% -19 - C1 -2OI5 8.1 GLMU_ECOLI
27 PsiBlast_CBE 73.7742% -19 - C1 -2OI6 8.4 GLMU_ECOLI
57 Fugue 73.7342% -18 - C1 -1HV9 6.5 GLMU_ECOLI
25 PsiBlast_CBE 73.4542% -17 - C1 -2OI7 7.9 GLMU_ECOLI
31 PsiBlast_CBE 73.4342% -18 - C1 -1HV9 8.1 GLMU_ECOLI
44 PsiBlast_CBE 72.9042% -11 * C1 *2V0I 5.9 GLMU_HAEIN
30 PsiBlast_CBE 72.7942% -18 - C1 -2OI5 6.8 GLMU_ECOLI
18 PsiBlast_PDB 72.4742% 0 - C1 -4K6R 6.8 GLMU_MYCTO
12 PsiBlast_PDB 72.4542% -3 - C1 -3ST8 5.8 GLMU_MYCTU
65 HHSearch 72.3042% -1 - C1 -4G3Q 7.2 GLMU_MYCTU
8 PsiBlast_PDB 71.4642% -0 - C1 -3D8V 5.5 GLMU_MYCTU
14 PsiBlast_PDB 70.6042% -4 - C1 -4HCQ 3.6 GLMU_MYCTU
16 PsiBlast_PDB 70.2742% 2 - C1 -4G3Q 7.2 GLMU_MYCTU
11 PsiBlast_PDB 69.5942% -1 - C1 -3SPT 5.6 GLMU_MYCTU
17 PsiBlast_PDB 69.1742% -3 - C1 -4G3S 6.6 GLMU_MYCTU
13 PsiBlast_PDB 69.0242% -4 - C1 -4G87 6.7 GLMU_MYCTU
15 PsiBlast_PDB 68.9942% -2 - C1 -4G3P 7.4 ?
10 PsiBlast_PDB 66.8242% 0 - C1 -3DJ4 7.2 GLMU_MYCTU
71 HHSearch 64.0742% -6 - C1 -2QKX 3.5 GLMU_MYCTU
47 PsiBlast_CBE 61.5143% -4 - C1 -2QKX 3.5 GLMU_MYCTU
58 Fugue 58.0238% -32 - C1 -1FXJ 2.7 GLMU_ECOLI
49 PsiBlast_CBE 57.2738% -32 - C1 -1FXJ 2.7 GLMU_ECOLI
75 HHSearch 52.1136% -39 - C1 -1FXJ 1.4 GLMU_ECOLI
59 Fugue 46.5458% 31 - C1 -1G97 9.0 GLMU_STRPN