@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U5K2: (2017-12-29 )
MKSLAGHVVKYGKHRERRSFARISEVLELPNLIEIQTDSYQWFLDEGLREMFEDILPIDDFNGNLSLEFVDYELKEPKYTVAEARAHDANYSAPLHVTLRLTNRETGEIKAQEVFFGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKEGFGSTVIPNRGAWLEMETDAKDISYVRIDRTRKIPLTVLVRALGFGSDDTIFEIFGDSETLRNTVEKDLHKNASDSRTEEGLKDVYERLRPGEPKTADSSRNLLNARFFDPKRYDLANVGRYKVNKKLDLKTRLLNLTLAETLVDPETGEIIVEKGTVLTHQVMETLAPFIDNGLNSVTYYPSEDGVVTDPMTVQVIKVFSPRDPEREVNVIGNGYPEAAVKTVRPADIIASMSYFLNLMEGIGNVDDIDHLGNRRIRSVGELLQNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQTNPLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNKFGFIETPYRRVDRETGRVTDQIDYLTADIEDHYIVAQANSPLNEDGTFAQDVVMARAQSENLEVSIDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLINPQAPWVGTGMEYKSAHDSGAALLCKHDGVVEYVDASEIRVRRDNGALDKYDVTKFRRSNSGTSYNQRPIVHLGEKVEKGDTLADGPSMEQGEMALGQNVLVGFMTWEGYNYEDAIIMSRRLVKDDVYTSIHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVQDGDLLVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREAGDELSPGVNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPIDIMLNPLGVPSRMNIGQVLELHLGMAARQLGIHVATPVFDGASDEDVWETVREAGMASDAKTVLYDGRTGEPFDGRVSVGVMYMIKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLDMRVLDIEETEIELRDMDDEDDDLITVDALTKFAEQQTAKELEKKAAEQVEDEKDDVIQNFETAEDNLD

Atome Classification :

(66 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_G_7(5VO8)
?
[Raw transfer]
-
NACID_I_13(4WQS)
RPOB_THET8
[Raw transfer]
-
NACID_H_7(5UHA)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_13(4G7Z)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4Q5S)
RPOB_THET8
[Raw transfer]
-
NACID_S_18(5X22)
?
[Raw transfer]
-
NACID_H_8(4OIO)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4OIP)
RPOB_THET8
[Raw transfer]
-
NACID_H_7(5UHD)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_7(5UH6)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_8(4OIN)
RPOB_THET8
[Raw transfer]
-
NACID_H_7(5UH9)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_7(5UHA)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_8(4G7H)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4OIR)
RPOB_THET8
[Raw transfer]
-
NACID_H_8(4OIQ)
RPOB_THET8
[Raw transfer]
-
NACID_H_7(5UHG)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_7(5UH5)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_8(4G7O)
RPOB_THET8
[Raw transfer]
-
NACID_H_7(5UHE)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_7(5UHF)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_7(5UHB)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_7(5UHC)
RPOB_MYCTU
[Raw transfer]
-
NACID_H_7(5UH8)
RPOB_MYCTU
[Raw transfer]
-
NACID_T_18(4XLN)
?
[Raw transfer]
-
NACID_Q_15(4XLN)
?
[Raw transfer]
-
NACID_T_20(4XLR)
RPOB_THEAQ
[Raw transfer]
-
NACID_R_15(5D4C)
RPOB_THET8
[Raw transfer]
-
NACID_G_8(5D4E)
RPOB_THET8
[Raw transfer]
-
NACID_R_15(5D4E)
RPOB_THET8
[Raw transfer]
-
NACID_G_7(5D4C)
RPOB_THET8
[Raw transfer]
-
NACID_R_3(5UP6)
RPOB_ECOLI
[Raw transfer]
-
NACID_V_22(5I2D)
RPOB_THET8
[Raw transfer]
-
NACID_I_9(5X22)
?
[Raw transfer]
-
NACID_K_11(5I2D)
RPOB_THET8
[Raw transfer]
-
NACID_I_9(5X21)
?
[Raw transfer]
-
NACID_G_7(5E18)
RPOB_THET8
[Raw transfer]
-
NACID_Z_16(4WQS)
RPOB_THET8
[Raw transfer]
-
NACID_G_8(5UHG)
RPOB_MYCTU
[Raw transfer]
-
NACID_R_3(5UPA)
?
[Raw transfer]
-
NACID_R_3(5UPC)
RPOB_ECOLI
[Raw transfer]
-
NACID_G_1(2O5I)
RPOB_THET8
[Raw transfer]
-
NACID_X_4(2O5I)
RPOB_THET8
[Raw transfer]
-
NACID_G_7(5E17)
RPOB_THET8
[Raw transfer]
-
NACID_G_1(2O5J)
RPOB_THET8
[Raw transfer]
-
NACID_G_7(4Q4Z)
RPOB_THET8
[Raw transfer]
-
NACID_Q_17(4XLR)
RPOB_THEAQ
[Raw transfer]
-
NACID_R_15(4G7Z)
RPOB_THET8
[Raw transfer]
-
NACID_X_4(2O5J)
RPOB_THET8
[Raw transfer]
-
NACID_U_21(3AOI)
RPOB_THET8
[Raw transfer]
-
NACID_Q_17(3AOI)
RPOB_THET8
[Raw transfer]
-
NACID_Q_17(3AOH)
RPOB_THET8
[Raw transfer]
-
NACID_R_16(4G7H)
RPOB_THET8
[Raw transfer]
-
NACID_R_17(4G7O)
RPOB_THET8
[Raw transfer]
-
NACID_S_19(3AOI)
RPOB_THET8
[Raw transfer]
-
121 HHSearch 91.5955% 0 - C- -2PPB - RPOB_THET8 -
76 PsiBlast_CBE 70.0858% 0 - C- -2A68 - RPOB_THET8 -
75 PsiBlast_CBE 70.0858% 0 - C- -2A68 - RPOB_THET8 -
74 PsiBlast_CBE 70.0858% 0 - C- -2A69 - RPOB_THET8 -
73 PsiBlast_CBE 70.0858% 0 - C- -2A69 - RPOB_THET8 -
64 PsiBlast_CBE 70.0858% 0 - C- -2PPB - RPOB_THET8 -
63 PsiBlast_CBE 70.0858% 0 - C- -2PPB - RPOB_THET8 -
118 HHSearch 67.6962% 42 - C2 -5UHA Error RPOB_MYCTU
117 HHSearch 66.7864% 45 - C2 -5VI8 - RPOB_MYCS2 -
119 HHSearch 66.7457% 47 - C2 -5UAC - RPOB_ECOLI -
1 PsiBlast_PDB 62.7064% 42 - C2 -5TW1 - RPOB_MYCS2 -
36 PsiBlast_CBE 62.5858% 23 - C2 -5D4C 3.4 RPOB_THET8
53 PsiBlast_CBE 62.5258% 22 - C2 -4G7H 3.5 RPOB_THET8
2 PsiBlast_PDB 62.5064% 42 - C2 -5VI8 - RPOB_MYCS2 -
46 PsiBlast_CBE 62.3658% 23 - C2 -4MQ9 - RPOB_THET8 -
32 PsiBlast_CBE 62.3258% 24 - C2 -5E17 4.1 RPOB_THET8
51 PsiBlast_CBE 62.2958% 22 - C2 -4G7O 3.6 RPOB_THET8
54 PsiBlast_CBE 62.2758% 22 - C2 -4G7H 3.4 RPOB_THET8
33 PsiBlast_CBE 62.2758% 24 - C2 -5D4E 3.1 RPOB_THET8
11 PsiBlast_PDB 62.2062% 43 - C2 -5UHE 3.8 RPOB_MYCTU
43 PsiBlast_CBE 62.1958% 26 - C2 -4OIP 3.8 RPOB_THET8
52 PsiBlast_CBE 62.1558% 22 - C2 -4G7O 3.9 RPOB_THET8
24 PsiBlast_CBE 62.1358% 26 - C2 -5X22 3.3 ?
40 PsiBlast_CBE 62.0858% 23 - C2 -4Q4Z 3.0 RPOB_THET8
29 PsiBlast_CBE 62.0858% 25 - C2 -5I2D 2.5 RPOB_THET8
30 PsiBlast_CBE 62.0558% 24 - C2 -5I2D 2.1 RPOB_THET8
41 PsiBlast_CBE 62.0158% 24 - C2 -4OIR 3.7 RPOB_THET8
8 PsiBlast_PDB 61.9962% 45 - C2 -5UHB 4.2 RPOB_MYCTU
45 PsiBlast_CBE 61.9658% 23 - C2 -4OIN 3.9 RPOB_THET8
35 PsiBlast_CBE 61.9658% 24 - C2 -5D4C 3.2 RPOB_THET8
42 PsiBlast_CBE 61.9358% 24 - C2 -4OIQ 3.4 RPOB_THET8
25 PsiBlast_CBE 61.9358% 22 - C2 -5X21 2.5 ?
44 PsiBlast_CBE 61.9258% 22 - C2 -4OIO 3.1 RPOB_THET8
23 PsiBlast_CBE 61.9258% 21 - C2 -5X22 3.2 ?
6 PsiBlast_PDB 61.8662% 44 - C2 -5UH9 4.4 RPOB_MYCTU
31 PsiBlast_CBE 61.8458% 25 - C2 -5E18 4.3 RPOB_THET8
39 PsiBlast_CBE 61.7758% 24 - C2 -4Q5S 3.9 RPOB_THET8
4 PsiBlast_PDB 61.6162% 46 - C2 -5UH6 4.2 RPOB_MYCTU
3 PsiBlast_PDB 61.5462% 45 - C2 -5UH5 3.6 RPOB_MYCTU
7 PsiBlast_PDB 61.5062% 44 - C2 -5UHA 3.3 RPOB_MYCTU
49 PsiBlast_CBE 61.4558% 21 - C2 -4G7Z 3.6 RPOB_THET8
34 PsiBlast_CBE 61.4058% 25 - C2 -5D4E 3.3 RPOB_THET8
9 PsiBlast_PDB 61.3962% 44 - C2 -5UHC 3.5 RPOB_MYCTU
26 PsiBlast_CBE 61.3658% 24 - C2 -5VO8 4.2 ?
10 PsiBlast_PDB 61.3662% 45 - C2 -5UHD 4.1 RPOB_MYCTU
13 PsiBlast_PDB 61.2662% 44 - C2 -5UHG 3.8 RPOB_MYCTU
5 PsiBlast_PDB 61.2662% 45 - C2 -5UH8 3.8 RPOB_MYCTU
50 PsiBlast_CBE 61.1658% 21 - C2 -4G7Z 3.5 RPOB_THET8
12 PsiBlast_PDB 61.0962% 44 - C2 -5UHF 3.5 RPOB_MYCTU
22 PsiBlast_CBE 60.5257% 27 - C2 -4XLN 2.7 ?
65 PsiBlast_CBE 60.4958% 25 - C2 -2O5J 4.2 RPOB_THET8
17 PsiBlast_PDB 60.0457% 27 - C2 -4XLN 3.1 ?
67 PsiBlast_CBE 60.0158% 24 - C2 -2O5I 4.1 RPOB_THET8
21 PsiBlast_CBE 59.8057% 26 - C2 -4XLR 2.0 RPOB_THEAQ
62 PsiBlast_CBE 59.6158% 23 - C2 -3AOH 2.5 RPOB_THET8
68 PsiBlast_CBE 59.5258% 25 - C2 -2O5I 3.8 RPOB_THET8
66 PsiBlast_CBE 59.1858% 29 - C2 -2O5J 3.3 RPOB_THET8
20 PsiBlast_PDB 58.9757% 25 - C2 -4XLR 2.7 RPOB_THEAQ
59 PsiBlast_CBE 58.9258% 24 - C2 -3AOI 2.3 RPOB_THET8
61 PsiBlast_CBE 58.9158% 26 - C2 -3AOI 2.3 RPOB_THET8
37 PsiBlast_CBE 58.7958% 25 - C2 -4WQS 4.2 RPOB_THET8
60 PsiBlast_CBE 58.7158% 24 - C2 -3AOI 2.4 RPOB_THET8
38 PsiBlast_CBE 58.6358% 28 - C2 -4WQS 3.4 RPOB_THET8
86 PsiBlast_CBE 44.6561% -12 - C2 -5UP6 3.1 RPOB_ECOLI
84 PsiBlast_CBE 44.5361% -11 - C2 -5UPC 3.0 RPOB_ECOLI
85 PsiBlast_CBE 44.0961% -9 - C2 -5UPA 2.9 ?