@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XWD3: (2017-12-30 )
MVKRGDIYFADLSPVVGSEQGGTRPVLVIQNNLGNHFSPTIIVAAITAKMAKPKLPTHIGIKATGTGIERDSVILLEQIRTIDKSRLKEKVCHLDRPIMAEVDRALKISVGIEALTPVTK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACY_E_5(1NE8)
ENDOA_BACSU
[Raw transfer]



NACID_C_3(5HKC)
MAZF6_MYCTU
[Raw transfer]
-
NACID_C_3(5HK3)
MAZF6_MYCTU
[Raw transfer]
-
1 PsiBlast_PDB 96.2871%-156 - C1 -4HKE - ? -
30 HHSearch 94.8569%-148 - C1 -4MDX - ENDOA_BACSU -
3 PsiBlast_PDB 94.7070%-149 - C1 -4MDX - ENDOA_BACSU -
31 HHSearch 93.9768%-154 - C1 -4HKE - ? -
2 PsiBlast_PDB 93.3170%-145 - C1 -1NE8 3.3 ENDOA_BACSU
32 HHSearch 88.5760%-136 - C1 -4OF1 - MAZF_STAAM -
5 PsiBlast_PDB 88.5760%-136 - C1 -4OF1 - MAZF_STAAM -
10 PsiBlast_PDB 87.1359%-133 - C1 -2MF2 - MAZF_STAAN -
9 PsiBlast_PDB 86.1159%-141 - C1 -5DLO - MAZF_STAA8 -
28 HHSearch 85.6359%-139 - C1 -5DLO - MAZF_STAA8 -
29 HHSearch 85.0658%-130 - C1 -2MF2 - MAZF_STAAN -
6 PsiBlast_PDB 78.1559% - - C1 -4MZP - MAZF_STAAN -
7 PsiBlast_PDB 76.6959% - - C1 -4MZT - MAZF_STAAN -
34 HHSearch 72.4338% -37 - C1 -5HKC - MAZF6_MYCTU -
38 HHSearch 70.1234% 8 - C1 -5HJZ - MAZF9_MYCTU -
33 HHSearch 70.0838% -30 - C1 -5HK3 - MAZF6_MYCTU -
26 PsiBlast_CBE 70.0832% 4 - C1 -5HJZ - MAZF9_MYCTU -
37 HHSearch 69.5334% 5 - C1 -5HJZ - MAZF9_MYCTU -
48 Fugue 69.1237% -30 - C1 -5HK3 - MAZF6_MYCTU -
13 PsiBlast_PDB 68.7838% -37 - C1 -5HKC 3.9 MAZF6_MYCTU