@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XWF9: (2017-12-30 )
MKVAIVHNKEAKTIEVTERLNALLEQAGIQRDDHEPELVISVGGDGTLLSAFHHYSHCLNDVRFLGVHTGHLGFYTDWRDYELEELVDSLRTNREQSVSYPLLDVRISYLDETPDQHFLALNESTIKRANRTMVADVYIKNELFESFRGDGLTISTPTGSTAYNKSVGGAVIHPSINAFQLAEIASLNNRVFRTLGSPIVIAHDEWLEIKLENTEDYLVTVDQLNVAKANIRSIYYRIAEERIHFASYRHMHFWHRVKDAFISED

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_2(5EJH)
NADK1_LISMO
[Raw transfer]




A22_A_2(4DY6)
NADK1_LISMO
[Raw transfer]




NAP_A_2(5EJI)
NADK1_LISMO
[Raw transfer]




NAD_A_2(2I29)
NADK1_LISMO
[Raw transfer]




ZAS_A_3(3V7W)
NADK1_LISMO
[Raw transfer]




DTA_A_2(2I2C)
NADK1_LISMO
[Raw transfer]




DTA_A_2(2Q5F)
NADK1_LISMO
[Raw transfer]




NAP_A_2(2I2A)
NADK1_LISMO
[Raw transfer]




DTA_A_2(2I2C)
NADK1_LISMO
[Raw transfer]




5AJ_B_8(5DHR)
NADK1_LISMO
[Raw transfer]




5A9_C_10(5DHT)
NADK1_LISMO
[Raw transfer]




5AQ_B_9(5DHP)
NADK1_LISMO
[Raw transfer]




A2D_A_2(2I2D)
NADK1_LISMO
[Raw transfer]




NAD_A_3(2I2F)
NADK1_LISMO
[Raw transfer]




5AQ_C_10(5DHP)
NADK1_LISMO
[Raw transfer]




5A8_C_9(5DHU)
NADK1_LISMO
[Raw transfer]




5AK_B_8(5DHQ)
NADK1_LISMO
[Raw transfer]




5CI_A_3(3V8N)
NADK1_LISMO
[Raw transfer]




5N5_A_2(3V8Q)
NADK1_LISMO
[Raw transfer]




5AJ_C_10(5DHR)
NADK1_LISMO
[Raw transfer]




5AK_C_9(5DHQ)
NADK1_LISMO
[Raw transfer]




MTA_A_3(3V7U)
NADK1_LISMO
[Raw transfer]




ZNB_A_3(3V8P)
NADK1_LISMO
[Raw transfer]




5A8_A_6(5DHU)
NADK1_LISMO
[Raw transfer]




5A8_B_8(5DHU)
NADK1_LISMO
[Raw transfer]




5AJ_A_6(5DHR)
NADK1_LISMO
[Raw transfer]




5AK_D_11(5DHQ)
NADK1_LISMO
[Raw transfer]




5NB_A_3(3V8R)
NADK1_LISMO
[Raw transfer]




5AQ_D_12(5DHP)
NADK1_LISMO
[Raw transfer]




5A9_B_9(5DHT)
NADK1_LISMO
[Raw transfer]




5A9_A_7(5DHT)
NADK1_LISMO
[Raw transfer]




5AG_B_9(5DHS)
NADK1_LISMO
[Raw transfer]




5AG_D_11(5DHS)
NADK1_LISMO
[Raw transfer]




Z8B_A_3(3V8M)
NADK1_LISMO
[Raw transfer]




5A8_D_10(5DHU)
NADK1_LISMO
[Raw transfer]




5AJ_D_11(5DHR)
NADK1_LISMO
[Raw transfer]




5AK_A_6(5DHQ)
NADK1_LISMO
[Raw transfer]




5AG_A_7(5DHS)
NADK1_LISMO
[Raw transfer]




5AQ_A_7(5DHP)
NADK1_LISMO
[Raw transfer]




5AG_C_10(5DHS)
NADK1_LISMO
[Raw transfer]




ZAS_A_2(3V7W)
NADK1_LISMO
[Raw transfer]




AOC_A_3(3V80)
NADK1_LISMO
[Raw transfer]




MTA_A_2(3V7U)
NADK1_LISMO
[Raw transfer]




A3N_A_4(3V7Y)
NADK1_LISMO
[Raw transfer]




CC5_A_3(2I2B)
NADK1_LISMO
[Raw transfer]




5NB_A_2(3V8R)
NADK1_LISMO
[Raw transfer]




Z8B_A_2(3V8M)
NADK1_LISMO
[Raw transfer]




5 PsiBlast_PDB 96.7746%-114 - C8 -2I1W - NADK1_LISMO -
23 PsiBlast_CBE 96.0946%-110 - C8 -5DHU 4.6 NADK1_LISMO
13 PsiBlast_PDB 95.4046%-102 - C8 -3V7W 4.6 NADK1_LISMO
16 PsiBlast_PDB 95.3146%-104 - C8 -3V8M 4.4 NADK1_LISMO
41 PsiBlast_CBE 95.1946%-108 - C8 -5DHP 4.6 NADK1_LISMO
34 PsiBlast_CBE 95.0546%-107 - C8 -5DHR 4.9 NADK1_LISMO
19 PsiBlast_PDB 94.9346%-104 - C8 -5DHP 5.3 NADK1_LISMO
38 PsiBlast_CBE 94.4246%-106 - C8 -5DHQ 5.2 NADK1_LISMO
11 PsiBlast_PDB 94.0146%-107 - C8 -4DY6 7.6 NADK1_LISMO
12 PsiBlast_PDB 93.9146%-102 - C8 -3V7U 4.5 NADK1_LISMO
14 PsiBlast_PDB 93.8946%-106 - C8 -3V7Y 3.3 NADK1_LISMO
18 PsiBlast_PDB 93.7446%-107 - C8 -3V8P 7.9 NADK1_LISMO
3 PsiBlast_PDB 93.6946%-100 - C8 -3V8R 4.4 NADK1_LISMO
30 PsiBlast_CBE 93.6446%-104 - C8 -5DHS 3.9 NADK1_LISMO
46 PsiBlast_CBE 93.6345%-104 - C8 -5EJH 8.0 NADK1_LISMO
31 PsiBlast_CBE 93.5946%-105 - C8 -5DHS 4.7 NADK1_LISMO
8 PsiBlast_PDB 93.5846%-104 - C8 -2I2B 4.0 NADK1_LISMO
47 PsiBlast_CBE 93.5745%-102 - C8 -5EJI 8.8 NADK1_LISMO
20 PsiBlast_PDB 93.5546%-104 - C8 -5DHQ 5.3 NADK1_LISMO
7 PsiBlast_PDB 93.4246%-101 - C8 -2I2A 7.4 NADK1_LISMO
27 PsiBlast_CBE 93.3946%-107 - C8 -5DHT 4.2 NADK1_LISMO
35 PsiBlast_CBE 93.2046%-103 - C8 -5DHR 5.4 NADK1_LISMO
10 PsiBlast_PDB 93.1746%-108 - C8 -2I2D 5.9 NADK1_LISMO
24 PsiBlast_CBE 93.0946%-104 - C8 -5DHU 4.0 NADK1_LISMO
45 PsiBlast_CBE 93.0645%-104 - C8 -2I2F 6.5 NADK1_LISMO
29 PsiBlast_CBE 93.0146%-104 - C8 -5DHS 4.7 NADK1_LISMO
66 HHSearch 92.8646%-103 - C8 -2I2C 7.8 NADK1_LISMO
9 PsiBlast_PDB 92.8646%-103 - C8 -2I2C 7.8 NADK1_LISMO
40 PsiBlast_CBE 92.6446%-101 - C8 -5DHP 4.7 NADK1_LISMO
25 PsiBlast_CBE 92.4046%-101 - C8 -5DHT 3.9 NADK1_LISMO
1 PsiBlast_PDB 92.3846%-102 - C8 -2Q5F 7.4 NADK1_LISMO
26 PsiBlast_CBE 92.3346%-104 - C8 -5DHT 4.0 NADK1_LISMO
32 PsiBlast_CBE 92.2746%-103 - C8 -5DHR 4.7 NADK1_LISMO
6 PsiBlast_PDB 92.0946%-106 - C8 -2I29 7.2 NADK1_LISMO
15 PsiBlast_PDB 92.0246%-104 - C8 -3V80 4.6 NADK1_LISMO
37 PsiBlast_CBE 91.9946% -99 - C8 -5DHQ 5.7 NADK1_LISMO
17 PsiBlast_PDB 91.9546%-102 - C8 -3V8N 3.9 NADK1_LISMO
33 PsiBlast_CBE 91.8646%-102 - C8 -5DHR 4.7 NADK1_LISMO
2 PsiBlast_PDB 91.2646%-107 - C8 -3V8Q 4.3 NADK1_LISMO
36 PsiBlast_CBE 90.3946%-104 - C8 -5DHQ 4.4 NADK1_LISMO
39 PsiBlast_CBE 88.9546%-105 - C8 -5DHP 4.2 NADK1_LISMO
28 PsiBlast_CBE 87.6646%-105 - C8 -5DHS 4.6 NADK1_LISMO
22 PsiBlast_CBE 87.5646%-102 - C8 -5DHU 4.3 NADK1_LISMO
21 PsiBlast_CBE 85.5946% -96 - C8 -5DHU 4.1 NADK1_LISMO