@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XWN8: (2017-12-31 )
MVVGDFAVELDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIAAGHHYQESLDSEMFGVTSENVKLDFAKTQEWKENKVVHTLTSGVGFLLKKHKVETIEGEAFFVDDHTLRVIHPDSAQTYSFNNAIIATGSRPIEIPGFKFGGRVLDSTGGLALKEVPKKFVIIGGGVIGAELGGAYANLGAEVTILEGSPQILPTYEKDLVKLVEDDFKKKGVTVVTNAMAKEAVDNGDSVTVKYAVDGKEESVTADYVMVTVGRRPNTDDMGLEQAGVEVGERGLITVDKQGRTNVPNIYAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELASVGMTIKEAKDAGIEAKAYKFPFSGNGRALSLGKTEGFIRLVTTIEDNVLIGAQIGGVGASDMVSELALAIESGMNAEDIALTIHPHPSLGEIVMDASELALGLPIHI

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_5(1EBD)
DLDH1_GEOSE
[Raw transfer]



FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_B_8(2YQU)
?
[Raw transfer]



FAD_A_7(2YQU)
?
[Raw transfer]



FAD_A_3(1LPF)
DLDH_PSEFL
[Raw transfer]



FAD_A_4(2EQ7)
?
[Raw transfer]



FAD_B_6(2EQ7)
?
[Raw transfer]



FAD_A_3(5TR3)
?
[Raw transfer]



FAD_B_11(4JDR)
DLDH_ECOLI
[Raw transfer]



FAD_A_3(4JDR)
DLDH_ECOLI
[Raw transfer]



FAD_B_4(1LPF)
DLDH_PSEFL
[Raw transfer]



FAD_B_5(5TR3)
?
[Raw transfer]



FAD_B_4(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_A_3(3URH)
?
[Raw transfer]



FAD_A_2(5U25)
?
[Raw transfer]



FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]



FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]



FAD_A_2(5U25)
?
[Raw transfer]



FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]



FAD_B_4(2QAE)
DLDH_TRYCR
[Raw transfer]



EDO_B_7(3URH)
?
[Raw transfer]
1 PsiBlast_PDB 98.0763%-120 - C3 -1EBD - DLDH1_GEOSE -
21 PsiBlast_CBE 96.9163%-118 - C3 -1EBD 11.6 DLDH1_GEOSE
128 HHSearch 74.8045% -22 - C3 -2EQ6 - ? -
8 PsiBlast_PDB 74.2642% -15 - C3 -2YQU 12.1 ?
127 HHSearch 74.2145% -23 - C3 -2EQ8 - ? -
25 PsiBlast_CBE 74.1445% -22 - C3 -2EQ9 - ? -
28 PsiBlast_CBE 73.9145% -21 - C3 -2EQ9 - ? -
31 PsiBlast_CBE 73.6645% -22 - C3 -2EQ8 - ? -
29 PsiBlast_CBE 73.3545% -20 - C3 -2EQ8 - ? -
32 PsiBlast_CBE 73.1145% -19 - C3 -2EQ6 - ? -
39 PsiBlast_CBE 72.9342% -13 - C3 -2YQU 12.0 ?
22 PsiBlast_CBE 72.9145% -21 - C3 -2EQ9 - ? -
7 PsiBlast_PDB 72.8042% -14 - C3 -2EQ7 12.3 ?
24 PsiBlast_CBE 72.7945% -21 - C3 -2EQ9 - ? -
3 PsiBlast_PDB 72.7645% -19 - C3 -2EQ8 - ? -
4 PsiBlast_PDB 72.7045% -23 - C3 -2EQ9 - ? -
30 PsiBlast_CBE 72.6245% -22 - C3 -2EQ8 - ? -
2 PsiBlast_PDB 72.5545% -19 - C3 -2EQ6 - ? -
26 PsiBlast_CBE 72.3445% -20 - C3 -2EQ9 - ? -
40 PsiBlast_CBE 72.1842% -14 - C3 -2EQ7 12.5 ?
131 HHSearch 70.5839% 10 - C3 -3URH 2.8 ?
130 HHSearch 69.6839% 12 - C3 -3URH 12.0 ?
84 PsiBlast_CBE 69.6538% 1 - C3 -3LAD 12.5 DLDH_AZOVI
132 HHSearch 69.4642% 8 * C3 *2QAE 12.0 DLDH_TRYCR
19 PsiBlast_PDB 69.0339% 2 - C3 -5TR3 12.6 ?
18 PsiBlast_PDB 68.9338% 3 - C3 -3LAD 11.8 DLDH_AZOVI
136 HHSearch 68.4943% -4 - C3 -5U25 12.3 ?
85 PsiBlast_CBE 68.3639% 2 - C3 -5TR3 11.2 ?
116 Fugue 67.0356% 1 - C3 -1EBD 10.1 DLDH1_GEOSE
5 PsiBlast_PDB 66.3542% 20 - C3 -4JDR 13.0 DLDH_ECOLI
9 PsiBlast_PDB 66.1639% 18 - C3 -1LPF 11.3 DLDH_PSEFL
38 PsiBlast_CBE 66.0742% 21 - C3 -4JDR 13.0 DLDH_ECOLI
41 PsiBlast_CBE 65.4639% 17 - C3 -1LPF 11.0 DLDH_PSEFL
102 PsiBlast_CBE 62.5242% 3 - C3 -5U25 12.2 ?
20 PsiBlast_PDB 61.2041% 31 - C3 -2QAE 10.6 DLDH_TRYCR
86 PsiBlast_CBE 60.8741% 32 - C3 -2QAE 10.6 DLDH_TRYCR