@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XWS2: (2017-12-31 )
MISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESIRTFDMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEKGRLIGYNTDGAGFMQSVQEAGISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSYRTSCKIKVRDFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKLFD

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_5(3TNL)
AROE_LISMO
[Raw transfer]




NAP_B_6(1NVT)
AROE_METJA
[Raw transfer]




NAD_C_10(3TNL)
AROE_LISMO
[Raw transfer]




NAP_A_5(1NVT)
AROE_METJA
[Raw transfer]




DHK_A_6(2O7Q)
DHQSD_ARATH
[Raw transfer]




SKM_A_5(2EV9)
AROE_THET8
[Raw transfer]




SKM_A_7(2D5C)
AROE_THET8
[Raw transfer]




SKM_A_6(3TNL)
AROE_LISMO
[Raw transfer]




SKM_B_6(2EV9)
AROE_THET8
[Raw transfer]




SKM_C_11(3TNL)
AROE_LISMO
[Raw transfer]




SKM_A_6(3TNL)
AROE_LISMO
[Raw transfer]




SKM_C_10(2HK9)
AROE_AQUAE
[Raw transfer]




SKM_B_6(2EV9)
AROE_THET8
[Raw transfer]




SKM_A_7(2D5C)
AROE_THET8
[Raw transfer]




SKM_D_12(2HK9)
AROE_AQUAE
[Raw transfer]




SKM_A_6(2HK9)
AROE_AQUAE
[Raw transfer]




DHK_A_5(2O7S)
DHQSD_ARATH
[Raw transfer]




SKM_B_8(2D5C)
AROE_THET8
[Raw transfer]




SKM_B_8(2HK9)
AROE_AQUAE
[Raw transfer]




SKM_A_2(3DOO)
AROE_STAEQ
[Raw transfer]




25 PsiBlast_CBE 96.8345%-114 - C3 -3TOZ - AROE_LISMO -
27 PsiBlast_CBE 96.3245%-111 - C3 -3TOZ - AROE_LISMO -
1 PsiBlast_PDB 96.2545%-111 - C3 -3TOZ - AROE_LISMO -
26 PsiBlast_CBE 96.1845%-112 - C3 -3TOZ - AROE_LISMO -
2 PsiBlast_PDB 96.0245%-112 - C3 -3TNL 6.9 AROE_LISMO
30 PsiBlast_CBE 95.9945%-112 - C3 -3TNL - AROE_LISMO -
28 PsiBlast_CBE 95.9345%-112 - C3 -3TNL - AROE_LISMO -
22 PsiBlast_CBE 95.1945%-111 - C3 -3TOZ - AROE_LISMO -
23 PsiBlast_CBE 95.1345%-111 - C3 -3TOZ - AROE_LISMO -
21 PsiBlast_CBE 94.7845%-109 - C3 -3TOZ - AROE_LISMO -
29 PsiBlast_CBE 94.0345%-111 - C3 -3TNL 6.1 AROE_LISMO
24 PsiBlast_CBE 93.9545%-110 - C3 -3TOZ - AROE_LISMO -
31 PsiBlast_CBE 90.0738%-103 - C3 -3T4E - YDIB_SALTY -
3 PsiBlast_PDB 89.9736%-107 - C3 -1VI2 - YDIB_ECOLI -
4 PsiBlast_PDB 89.6036% -97 - C3 -1NPD - YDIB_ECOLI -
6 PsiBlast_PDB 89.5238%-102 - C3 -3T4E - YDIB_SALTY -
5 PsiBlast_PDB 88.6236%-103 - C3 -1O9B - YDIB_ECOLI -
40 HHSearch 88.0845% -52 - C3 -3TNL 3.2 AROE_LISMO
41 HHSearch 87.8645% -52 - C3 -3TOZ - AROE_LISMO -
39 HHSearch 85.1839% -47 - C3 -1NPD - YDIB_ECOLI -
11 PsiBlast_PDB 83.3435%-128 - C3 -2HK9 4.0 AROE_AQUAE
35 PsiBlast_CBE 83.2035%-125 - C3 -2HK9 3.0 AROE_AQUAE
33 PsiBlast_CBE 83.1435%-121 - C3 -2HK9 4.0 AROE_AQUAE
34 PsiBlast_CBE 80.5335%-120 - C3 -2HK9 3.5 AROE_AQUAE
56 HHSearch 77.8839%-105 * C3 *2EV9 3.8 AROE_THET8
55 HHSearch 76.7739%-103 - C3 -2D5C 3.8 AROE_THET8
7 PsiBlast_PDB 75.6943% -66 - C3 -1NVT 6.5 AROE_METJA
32 PsiBlast_CBE 75.5943% -61 - C3 -1NVT 6.4 AROE_METJA
38 PsiBlast_CBE 54.7137% -18 - C3 -2D5C 3.3 AROE_THET8
16 PsiBlast_PDB 54.6337% 1 - C3 -2D5C 3.1 AROE_THET8
17 PsiBlast_PDB 54.5637% 1 - C3 -2EV9 2.9 AROE_THET8
37 PsiBlast_CBE 54.2937% -2 - C3 -2EV9 2.9 AROE_THET8
13 PsiBlast_PDB 49.6533% -26 - C3 -3DOO 3.5 AROE_STAEQ