@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XWZ7: (2018-01-01 )
MAQRIPQEVIETVRSQTNIVEVIGQYVQLKKSGKNYLGLCPFHEERTPSFSVAEDKQIFHCFGCGKGGNVFTFLQELEGLSFPEAVVKVADFEQIPLEDQWRQRTIAVQNPESATGKLIAAHEKAAEIYHHMLLHTKAGQPALEYLQSRGLSLELIEEFNIGFAPNERSFLQQVFKNESISNELLERSGLFVTHDDGRMSDRFYQRVMFPLRNSQGQTIGFSGRWLAPEKGQEKDQPKYLNSPETELFNKRQVLFNLDKARSDIRKNGEILLFEGFMDVIAAWQAGIKTGLASMGTSLTAQQIQQMEKLTKELVFCYDGDNAGFEATNRGIELLRQNSRLALSVVVVPEKLDPDEYLRKYGEASFQELVAHGRETVFTFKSRYLKQGKNLDNEKDKIEYLEELLVELSRVVSPIEQDMYLSQLSTEFQIGRETIQKQLRDLRRTNQQNRQEPQESQHTQVTRQETARKKRPLTQVEKAEQILLYRAFKEVSVRNILKEREFQFIHDAYAEVYFLFDAYVSQHYEFNLAEFLDFLQDENLRRLVVEIEYLPVAEESSPREIQDLLDVISKSGLADEITLKKQMQQEARRTGNKQLELELTIEIINLTKQLKQAK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GTP_A_5(4EDK)
DNAG_STAAU
[Raw transfer]



GTP_A_5(4EDK)
DNAG_STAAU
[Raw transfer]



GTP_A_5(4EDK)
DNAG_STAAU
[Raw transfer]



ATP_A_4(4EDG)
DNAG_STAAU
[Raw transfer]



UTP_A_5(4EDR)
DNAG_STAAU
[Raw transfer]



CTP_A_2(4EE1)
DNAG_STAAU
[Raw transfer]



0O2_A_3(4EDV)
DNAG_STAAU
[Raw transfer]



G4P_A_3(4EDT)
DNAG_STAAU
[Raw transfer]



NACID_C_1(3B39)
DNAG_ECOLI
[Raw transfer]
-
NACID_C_1(3B39)
DNAG_ECOLI
[Raw transfer]
-
BEN_A_4(4EDR)
DNAG_STAAU
[Raw transfer]



BEN_A_4(4EDK)
DNAG_STAAU
[Raw transfer]



NACID_D_2(3B39)
DNAG_ECOLI
[Raw transfer]
-
23 HHSearch 87.0531%-107 * C4 *2AU3 - DNAG_AQUAE -
1 PsiBlast_PDB 84.4141% -36 - C4 -5GUJ - DNAG_BACSU -
25 HHSearch 83.5041% -37 - C4 -5GUJ - DNAG_BACSU -
7 PsiBlast_PDB 81.8239% -28 - C4 -4EDT 4.3 DNAG_STAAU
49 Fugue 81.5338% -35 - C4 -4EDK 6.9 DNAG_STAAU
8 PsiBlast_PDB 81.3539% -28 - C4 -4EDV 4.9 DNAG_STAAU
5 PsiBlast_PDB 81.2639% -23 - C4 -4EDK 6.9 DNAG_STAAU
6 PsiBlast_PDB 81.2539% -25 - C4 -4EDR 6.9 DNAG_STAAU
4 PsiBlast_PDB 81.1439% -26 - C4 -4EDG 6.8 DNAG_STAAU
3 PsiBlast_PDB 81.0239% -32 - C4 -4E2K - DNAG_STAAU -
9 PsiBlast_PDB 80.7839% -26 - C4 -4EE1 6.2 DNAG_STAAU
28 HHSearch 80.7439% -31 - C4 -4EDK 6.9 DNAG_STAAU
2 PsiBlast_PDB 77.9933% -9 - C4 -2AU3 - DNAG_AQUAE -
24 HHSearch 76.4231% -52 - C4 -5VAZ - DNAG_PSEAE -
27 HHSearch 73.8033% -88 - C4 -1DD9 - DNAG_ECOLI -
26 HHSearch 73.7633% -78 - C4 -3B39 3.9 DNAG_ECOLI
50 Fugue 73.6732% -71 - C4 -1DD9 - DNAG_ECOLI -
12 PsiBlast_PDB 68.1839% -64 - C4 -5VAZ - DNAG_PSEAE -
22 PsiBlast_CBE 67.2139% -92 - C4 -3B39 7.4 DNAG_ECOLI
14 PsiBlast_PDB 65.7039% -95 - C4 -1EQN - DNAG_ECOLI -
13 PsiBlast_PDB 64.9639% -97 - C4 -3B39 3.9 DNAG_ECOLI