@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XX04: (2018-01-01 )
MKKYNWNETNVITMPKEKEVALYTDDLHVWYGDNEAIKGVDLEFEKNKITALIGPSGCGKSTYLRSLNRMNDGIANTKITGKIMYQGVDINAPQVDVYEMRKRIGMVFQRPNPFSKSIYDNITFALKQHGEKNKKKLDEIVETSLKQAALWDQVKDSLDKSALALSGGQQQRLCIARAIAMKPDILLLDEPASALDPISTGTVEETLVNLKEDYTIIIVTHNMQQAARISDYTAFFYLGKVMEYDKTNKIFTRPKIQATEDYVSGHFG

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]
5 PsiBlast_PDB 85.3936% -57 - C1 -4YMW - ? -
22 PsiBlast_CBE 85.1136% -54 - C1 -4YMU 5.8 ?
3 PsiBlast_PDB 85.0036% -56 - C1 -4YMU 5.4 ?
31 PsiBlast_CBE 84.0135% -35 - C1 -2OLK 6.0 ?
4 PsiBlast_PDB 83.7636% -54 - C1 -4YMV - ? -
2 PsiBlast_PDB 83.5636% -53 - C1 -4YMT - ? -
1 PsiBlast_PDB 82.7936% -55 - C1 -4YMS - ? -
21 PsiBlast_CBE 82.5136% -54 - C1 -4YMV 5.1 ?
35 PsiBlast_CBE 82.2035% -33 - C1 -3C41 5.9 ?
10 PsiBlast_PDB 82.0935% -33 - C1 -2OUK - ? -
26 PsiBlast_CBE 81.0235% -23 - C1 -3C4J 4.8 ?
13 PsiBlast_PDB 80.4135% -25 - C1 -3C41 6.8 ?
9 PsiBlast_PDB 80.2135% -32 - C1 -2OLK 6.1 ?
33 PsiBlast_CBE 79.7235% -38 - C1 -2OLK 5.9 ?
8 PsiBlast_PDB 79.1635% -32 - C1 -2OLJ 6.2 ?
34 PsiBlast_CBE 78.9135% -25 - C1 -2OLJ 5.8 ?
32 PsiBlast_CBE 78.7835% -32 - C1 -2OLK 6.3 ?
12 PsiBlast_PDB 78.7135% -27 - C1 -3C4J 6.6 ?
11 PsiBlast_PDB 77.5035% -27 - C1 -2Q0H 5.5 ?
7 PsiBlast_PDB 74.2235% -15 - C1 -4U02 - ? -
14 PsiBlast_PDB 71.6733% -14 - C1 -1B0U 5.8 HISP_SALTY