@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XX11: (2018-01-01 )
MRKVIIDCDPGIDDTLALSLAVKSPDIEVVAITVVCGNVPADIGTQNVLKCLERCDRLDIPVYQGMEKPLKQPFISAQDTHGMDGLGETNFPMILRKQAEPLHAVDFLADYFKEKTNTSVIALGPLTNIASALKVNPNIGKHMERFVSMGGTYKSHGNCSPVAEYNYWCDPEAASYVFENLKQTIEMVGLDVTREIVLTPTILEYCCQMNPEEGEYLKAITRFYFDFHWKQERILGCVINDPLAVAYFIEEAICEGFKSFTAVETQGISRGQTLVDRYEFWQKPANSKIMTKVDTRLFFRKFLTVLLNAQEETIMKDLERLKMG

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PIR_D_12(2MAS)
IUNH_CRIFA
[Raw transfer]



PIR_B_10(2MAS)
IUNH_CRIFA
[Raw transfer]



DNB_C_10(3MKN)
?
[Raw transfer]



NOS_D_12(3B9X)
RIHB_ECOLI
[Raw transfer]



BDR_A_3(5TSQ)
?
[Raw transfer]



BDR_A_3(5TSQ)
?
[Raw transfer]



DNB_D_13(3G5I)
RIHA_ECOLI
[Raw transfer]



RIB_A_2(1YOE)
RIHA_ECOLI
[Raw transfer]



NOS_C_11(3B9X)
RIHB_ECOLI
[Raw transfer]



GOL_D_12(1Q8F)
RIHB_ECOLI
[Raw transfer]



GOL_C_11(1Q8F)
RIHB_ECOLI
[Raw transfer]



GOL_C_11(1Q8F)
RIHB_ECOLI
[Raw transfer]



GOL_B_10(1Q8F)
RIHB_ECOLI
[Raw transfer]



GOL_A_9(1Q8F)
RIHB_ECOLI
[Raw transfer]



TRS_B_6(5MJ7)
?
[Raw transfer]



DNB_C_11(3G5I)
RIHA_ECOLI
[Raw transfer]



TRS_A_4(5MJ7)
?
[Raw transfer]
1 PsiBlast_PDB 91.0635% -57 - C5 -1EZR - IUNH_LEIMA -
88 HHSearch 90.1433% -68 - C5 -1Q8F 2.8 RIHB_ECOLI
87 HHSearch 88.6433% -67 - C5 -3MKM - ? -
105 Fugue 87.6532% -53 - C5 -1EZR - IUNH_LEIMA -
10 PsiBlast_PDB 86.9033% -54 - C5 -5TSQ 4.1 ?
97 HHSearch 86.7031% -55 - C5 -3G5I - RIHA_ECOLI -
2 PsiBlast_PDB 86.4432% -53 - C5 -1MAS - IUNH_CRIFA -
24 PsiBlast_CBE 86.4232% -51 - C5 -2MAS 4.3 IUNH_CRIFA
26 PsiBlast_CBE 86.2132% -51 - C5 -2MAS 4.3 IUNH_CRIFA
84 HHSearch 86.1533% -35 - C5 -4KPO - ? -
3 PsiBlast_PDB 85.8832% -50 - C5 -2MAS - IUNH_CRIFA -
95 HHSearch 85.8433% -39 - C5 -3FZ0 - ? -
25 PsiBlast_CBE 85.2732% -50 - C5 -2MAS - IUNH_CRIFA -
96 HHSearch 84.9033% -28 - C5 -3FZ0 - ? -
83 HHSearch 84.7633% -39 - C5 -4KPO - ? -
104 Fugue 84.2730% -47 - C5 -2MAS - IUNH_CRIFA -
54 PsiBlast_CBE 83.8031% -36 - C5 -3FZ0 - ? -
85 HHSearch 83.7133% -43 - C5 -3T8J - ? -
14 PsiBlast_PDB 83.5733% -54 - C5 -3T8J - ? -
53 PsiBlast_CBE 83.2531% -40 - C5 -3FZ0 - ? -
86 HHSearch 81.6731% -44 * C5 *5TSQ 4.1 ?
7 PsiBlast_PDB 78.4533% -29 - C5 -1Q8F 2.9 RIHB_ECOLI
40 PsiBlast_CBE 78.1833% -29 - C5 -1Q8F 2.8 RIHB_ECOLI
42 PsiBlast_CBE 77.8133% -29 - C5 -1Q8F 2.8 RIHB_ECOLI
41 PsiBlast_CBE 77.7933% -27 - C5 -1Q8F 2.8 RIHB_ECOLI
36 PsiBlast_CBE 76.4633% -38 - C5 -3MKN 3.3 ?
48 PsiBlast_CBE 76.0132% -48 - C5 -3G5I 3.4 RIHA_ECOLI
44 PsiBlast_CBE 75.4433% -33 - C5 -3B9X 3.8 RIHB_ECOLI