@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XX23: (2018-01-01 )
MAKEHYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLGKKGLANPQDYASIDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVSATDGPMPQTREHILLSRQVGVKYLIVFLNKVDLVDDEELIDLVEMEVRELLSEYGFPGDDTPVIKGSALKALQGDPDAEAAIMELMDTVDEYIPTPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGAVRVGDEVEIVGIKPETQKAVVTGVEMFRKTLDYGEAGDNVGVLLRGIQRDDIERGQVLAKPGSITPHTKFKAEVYVLTKEEGGRHTPFFNNYRPQFYFRTTDVTGTITLPEDTEMVMPGDNVTIDVDLIHPIAVENGTTFSIREGGRTVGSGIVTEIEA

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_H_6(1DG1)
EFTU2_ECOLI
[Raw transfer]




GNP_A_2(4LBW)
EFTU1_THETH
[Raw transfer]




GNP_A_2(4LBV)
EFTU1_THETH
[Raw transfer]




GNP_P_9(1B23)
EFTU_THEAQ
[Raw transfer]




PPV_B_9(2PMD)
IF2G_SULSO
[Raw transfer]




GTP_A_3(3VMF)
EF1A_AERPE
[Raw transfer]




GNP_A_2(4LBZ)
EFTU1_THETH
[Raw transfer]




GNP_A_2(2C78)
EFTU1_THET8
[Raw transfer]




GNP_A_3(2BVN)
EFTU2_ECOLI
[Raw transfer]




GNP_A_2(2C78)
EFTU1_THET8
[Raw transfer]




GNP_A_3(1EXM)
EFTU1_THETH
[Raw transfer]




GNP_A_2(4H9G)
EFTU1_THETH
[Raw transfer]




GNP_A_3(2C77)
EFTU2_THET8
[Raw transfer]




GNP_B_6(2BVN)
EFTU2_ECOLI
[Raw transfer]




GNP_A_2(4LC0)
EFTU1_THETH
[Raw transfer]




GNP_A_5(1OB2)
EFTU2_ECOLI
[Raw transfer]




GNP_A_2(4LBY)
EFTU1_THETH
[Raw transfer]




GNP_A_3(1EFT)
EFTU_THEAQ
[Raw transfer]




GDP_G_5(1DG1)
EFTU2_ECOLI
[Raw transfer]




GDP_B_(1D8T)
EFTU1_ECOLI
[Raw transfer]




GDP_B_6(1EFC)
EFTU1_ECOLI
[Raw transfer]




GDP_A_5(1EFC)
EFTU1_ECOLI
[Raw transfer]




GDP_A_3(1HA3)
EFTU1_THET8
[Raw transfer]




GDP_A_3(5JBQ)
?
[Raw transfer]




GDP_A_6(1D8T)
EFTU1_ECOLI
[Raw transfer]




GDP_A_3(3U2Q)
?
[Raw transfer]




GCP_A_26(4M53)
IF2G_SULSO
[Raw transfer]




GDP_B_7(1HA3)
EFTU1_THET8
[Raw transfer]




GDP_A_5(3U6K)
EFTU1_ECOLI
[Raw transfer]




GDP_A_4(4P3Y)
?
[Raw transfer]




GDP_B_8(1TUI)
EFTU_THEAQ
[Raw transfer]




GDP_A_4(4G5G)
EFTU1_ECOLI
[Raw transfer]




GDP_C_9(1TUI)
EFTU_THEAQ
[Raw transfer]




GDP_K_10(4IW3)
EFTU1_PSEPK
[Raw transfer]




GDP_A_7(1TUI)
EFTU_THEAQ
[Raw transfer]




GNP_A_3(4PC7)
EFTU1_ECOLI
[Raw transfer]




GDP_A_5(4ZV4)
EFTU_PSEAE
[Raw transfer]




GDP_A_3(2FX3)
EFTU1_ECOLI
[Raw transfer]




GDP_B_7(3U6K)
?
[Raw transfer]




GNP_A_4(1KK1)
IF2G_PYRAB
[Raw transfer]




GDP_A_3(1ETU)
EFTU1_ECOLI
[Raw transfer]




GDP_B_7(4IW3)
EFTU1_PSEPK
[Raw transfer]




GNP_A_4(1KK1)
IF2G_PYRAB
[Raw transfer]




GDP_A_2(3PEN)
IF2G_SULSO
[Raw transfer]




GDP_B_7(4ZV4)
EFTU_PSEAE
[Raw transfer]




GNP_A_4(3QSY)
IF2G_SULSO
[Raw transfer]




GCP_B_6(3I1F)
IF2G_SULSO
[Raw transfer]




FMT_A_12(4RJL)
IF2G_SULSO
[Raw transfer]




FMT_A_24(4M53)
IF2G_SULSO
[Raw transfer]




GDP_A_3(1EFM)
EFTU2_ECOLI
[Raw transfer]




52 PsiBlast_CBE 92.5873% -90 - C2 -1D8T 8.7 EFTU1_ECOLI
20 PsiBlast_PDB 92.4873% -89 - C2 -4G5G 8.5 EFTU1_ECOLI
31 PsiBlast_CBE 91.6873% -92 - C2 -5JBQ 9.2 ?
51 PsiBlast_CBE 91.5973% -95 - C2 -1D8T 8.8 EFTU1_ECOLI
30 PsiBlast_CBE 91.5273% -95 - C2 -1DG1 8.3 EFTU2_ECOLI
35 PsiBlast_CBE 91.4073%-105 - C2 -4PC3 - EFTU1_ECOLI -
46 PsiBlast_CBE 90.8873% -94 - C2 -1EFC 8.8 EFTU1_ECOLI
18 PsiBlast_PDB 90.6973% -92 - C2 -3U6K 7.6 EFTU1_ECOLI
45 PsiBlast_CBE 90.4073% -89 - C2 -1EFC 8.5 EFTU1_ECOLI
41 PsiBlast_CBE 90.1973% -97 - C2 -4P3Y 9.6 ?
19 PsiBlast_PDB 90.0673% -96 - C2 -3U2Q 7.3 ?
28 PsiBlast_CBE 90.0573% -90 - C2 -3U6K 7.0 ?
37 PsiBlast_CBE 89.9173%-102 - C2 -4PC2 - ? -
29 PsiBlast_CBE 89.7573% -90 - C2 -1DG1 7.4 EFTU2_ECOLI
49 PsiBlast_CBE 89.1073% -88 - C2 -2FX3 7.0 EFTU1_ECOLI
36 PsiBlast_CBE 89.0373%-109 - C2 -4PC3 - EFTU1_ECOLI -
42 PsiBlast_CBE 88.4273% -83 * C2 *1OB2 6.6 EFTU2_ECOLI
33 PsiBlast_CBE 88.1073%-102 - C2 -4PC6 - ? -
38 PsiBlast_CBE 88.0673%-108 - C2 -4PC2 - ? -
43 PsiBlast_CBE 87.5873% -95 - C2 -2BVN 9.2 EFTU2_ECOLI
44 PsiBlast_CBE 86.9673% -93 - C2 -2BVN 8.7 EFTU2_ECOLI
32 PsiBlast_CBE 83.0073% -97 - C2 -4PC7 7.7 EFTU1_ECOLI
54 PsiBlast_CBE 80.9068% -20 - C2 -4ZV4 6.9 EFTU_PSEAE
53 PsiBlast_CBE 80.0668% -21 - C2 -4ZV4 4.7 EFTU_PSEAE
58 PsiBlast_CBE 77.7669% -26 - C2 -4IW3 7.6 EFTU1_PSEPK
59 PsiBlast_CBE 77.6669% -27 - C2 -4IW3 6.5 EFTU1_PSEPK
108 HHSearch 76.3473% 22 - C2 -2C78 9.4 EFTU1_THET8
3 PsiBlast_PDB 76.1971% 35 - C2 -1EFT 9.3 EFTU_THEAQ
4 PsiBlast_PDB 75.9771% 39 - C2 -1EXM 9.7 EFTU1_THETH
9 PsiBlast_PDB 75.7371% 36 - C2 -1B23 8.8 EFTU_THEAQ
16 PsiBlast_PDB 74.8571% 37 - C2 -4LBZ 9.6 EFTU1_THETH
2 PsiBlast_PDB 74.7771% 40 - C2 -4H9G 9.6 EFTU1_THETH
15 PsiBlast_PDB 74.7671% 37 - C2 -4LBY 9.5 EFTU1_THETH
17 PsiBlast_PDB 74.5571% 39 - C2 -4LC0 9.7 EFTU1_THETH
13 PsiBlast_PDB 74.4171% 38 - C2 -4LBV 9.6 EFTU1_THETH
6 PsiBlast_PDB 74.1871% 40 - C2 -2C77 9.8 EFTU2_THET8
14 PsiBlast_PDB 73.7871% 40 - C2 -4LBW 9.6 EFTU1_THETH
22 PsiBlast_CBE 73.6571% 36 - C2 -1TUI 6.1 EFTU_THEAQ
1 PsiBlast_PDB 73.6171% 39 - C2 -2C78 9.4 EFTU1_THET8
8 PsiBlast_PDB 73.3671% 37 - C2 -1TUI 6.6 EFTU_THEAQ
21 PsiBlast_CBE 72.9271% 12 - C2 -1HA3 8.3 EFTU1_THET8
23 PsiBlast_CBE 72.7371% 36 - C2 -1TUI 6.7 EFTU_THEAQ
5 PsiBlast_PDB 70.4771% 38 - C2 -1HA3 9.1 EFTU1_THET8
132 HHSearch 49.4234% 28 - C2 -1KK1 7.9 IF2G_PYRAB
50 PsiBlast_CBE 46.9273%-125 - C2 -1ETU 4.8 EFTU1_ECOLI
136 Fugue 45.8932% 48 - C2 -1KK1 7.9 IF2G_PYRAB
106 PsiBlast_CBE 28.5334% 3 - C2 -2PMD Error IF2G_SULSO
91 PsiBlast_CBE 23.9934% 26 - C2 -3PEN 8.3 IF2G_SULSO
103 PsiBlast_CBE 23.8934% 5 - C2 -3I1F 4.2 IF2G_SULSO
90 PsiBlast_CBE 22.4334% 22 - C2 -4M53 8.5 IF2G_SULSO
102 PsiBlast_CBE 19.4134% 20 - C2 -3QSY 4.9 IF2G_SULSO
60 PsiBlast_CBE 7.5672% - - C2 -1EFM 2.4 EFTU2_ECOLI