@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XX45: (2018-01-02 )
MHIQTKLIHGGISEDPTTGAVSVPIYQTSTYRQDGVGQPKQYEYSRSGNPTRFALEELIADLEGGVRGFAFSSGLSGIHAVFSLFQAGDHILLGDDVYGGTFRLFDKVLTKNGLEYTIIDTSNLDKIEQSIKPNTKALYLETPSNPLLKITDLEKSATLAHQHGLIVIADNTFATPYFQRPLDLGSDIVVHSGTKYLGGHSDVVAGLVTSNHKDLADQIGFYQNAIGAVLGPQDSWLLQRGIKTLSVRMEEHQKNAFVVADFLFSHPAVEKVYYPGLPDHELHGVAKQQMSGFSGMISFTLKNEESAIPFVESLQLFTLAESLGGVESLVEIPSVMTHASIPKEKREEAGIKDGLIRLSVGIEYGQDLINDLAQAFDRIKN

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]




PPJ_A_3(1E5E)
?
[Raw transfer]




PPJ_A_3(1E5E)
?
[Raw transfer]




LCS_A_2(4OMA)
?
[Raw transfer]




PY6_A_5(5M3Z)
?
[Raw transfer]




PLP_B_8(1E5F)
?
[Raw transfer]




PPJ_B_7(1E5E)
?
[Raw transfer]




PLP_A_3(1E5F)
?
[Raw transfer]




PZP_A_2(3MKJ)
?
[Raw transfer]




PLP_B_5(5DX5)
?
[Raw transfer]




PLP_A_3(5DX5)
?
[Raw transfer]




PLP_A_2(5X5H)
?
[Raw transfer]




PLP_A_2(5X5H)
?
[Raw transfer]




PLP_A_2(5K30)
?
[Raw transfer]




PLP_A_5(5E4Z)
?
[Raw transfer]




NLE_A_2(3JWB)
?
[Raw transfer]




MPJ_A_2(3JWA)
?
[Raw transfer]




EDO_A_22(1PFF)
?
[Raw transfer]




ECX_A_2(3JW9)
?
[Raw transfer]




1 PsiBlast_PDB 93.3775% -95 - C1 -4L0O - METB_HELPY -
26 PsiBlast_CBE 92.7975% -94 - C1 -4L0O - METB_HELPY -
22 PsiBlast_CBE 90.9975% -96 - C1 -4L0O - METB_HELPY -
24 PsiBlast_CBE 90.6175% -94 - C1 -4L0O - METB_HELPY -
21 PsiBlast_CBE 90.6175% -91 - C1 -4L0O - METB_HELPY -
25 PsiBlast_CBE 90.3175% -95 - C1 -4L0O - METB_HELPY -
27 PsiBlast_CBE 90.2875% -93 - C1 -4L0O - METB_HELPY -
140 HHSearch 82.3875% -18 - C1 -4L0O - METB_HELPY -
14 PsiBlast_PDB 79.8244% -97 - C1 -1IBJ - METC_ARATH -
139 HHSearch 79.6975% -23 - C1 -4L0O - METB_HELPY -
43 PsiBlast_CBE 78.4744% -94 - C1 -1IBJ - METC_ARATH -
3 PsiBlast_PDB 74.4752% -16 - C1 -4IY7 - ? -
30 PsiBlast_CBE 73.9952% -13 - C1 -4IY7 - ? -
29 PsiBlast_CBE 73.6852% -13 - C1 -4IY7 - ? -
28 PsiBlast_CBE 73.3552% -14 - C1 -4IY7 - ? -
4 PsiBlast_PDB 73.2852% -15 - C1 -4IYO - ? -
154 HHSearch 72.9739% -46 - C1 -4Q31 - ? -
135 HHSearch 72.4549% 2 - C1 -3COG - CGL_HUMAN -
50 PsiBlast_CBE 72.0942% -1 - C1 -3JWA 1.3 ?
48 PsiBlast_CBE 71.1042% 1 - C1 -3JW9 1.5 ?
49 PsiBlast_CBE 70.7442% 4 - C1 -3JWB 2.3 ?
40 PsiBlast_CBE 70.7247% 9 - C1 -5DX5 3.4 ?
16 PsiBlast_PDB 70.3342% -0 - C1 -4OMA 6.4 ?
18 PsiBlast_PDB 70.1042% -1 - C1 -4HF8 6.1 ?
42 PsiBlast_CBE 69.8747% 8 - C1 -1E5E 4.9 ?
41 PsiBlast_CBE 69.8747% 10 - C1 -1E5F 3.7 ?
17 PsiBlast_PDB 69.7742% 4 - C1 -5M3Z 5.3 ?
12 PsiBlast_PDB 69.2447% 9 - C1 -1E5F 3.8 ?
10 PsiBlast_PDB 69.1247% 12 - C1 -5DX5 3.0 ?
11 PsiBlast_PDB 68.7147% 11 - C1 -1E5E 5.4 ?
149 HHSearch 68.3649% 9 - C1 -1E5E 5.4 ?
15 PsiBlast_PDB 68.0042% 3 - C1 -5E4Z 3.1 ?
143 HHSearch 65.7946% 21 - C1 -5X5H 3.9 ?
56 PsiBlast_CBE 65.7148% -12 - C1 -1PFF 2.0 ?
13 PsiBlast_PDB 65.0446% 22 - C1 -5X5H 3.9 ?
20 PsiBlast_PDB 64.2042% 22 - C1 -3MKJ 5.5 ?
19 PsiBlast_PDB 63.0442% 24 - C1 -5K30 4.2 ?