@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XX82: (2018-01-02 )
MNDVLTLENLHHTFEKGTINENHVLKGINLSLDPGDFVTIIGGNGAGKSTLLNSIAGTFSVDQGQILLNGKNITKKSVVERSKSISRVFQDPKLGTAVRLTVEENLALAMKRGKKRGFFRGVKPQDRTFFKDQLVRLNLGLENRLSSEIGLLSGGQRQAITLLMATLQRPELILLDEHTAALDPATSKTVMELTEKLITEQNLTAFMVTHDMEDAIRYGSRLIMLHQGRIVVDIQQEEKQQLTVPQLLALFKQNSGTALKDDQVLLSS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]
32 Fugue 72.2725% -27 - C1 -1OXS - ? -
57 HHSearch 71.2635% -37 - C1 -3FVQ - FBPC_NEIG1 -
35 Fugue 71.0424% -64 - C1 -3TUZ - METN_ECOLI -
8 PsiBlast_PDB 70.1934% -55 - C1 -3FVQ - FBPC_NEIG1 -
31 Fugue 70.0924% -99 - C1 -1Z47 - ? -
21 PsiBlast_CBE 69.2934% -56 - C1 -3FVQ - FBPC_NEIG1 -
6 PsiBlast_PDB 68.4829% -58 - C1 -4U00 6.0 ?
7 PsiBlast_PDB 67.9829% -64 - C1 -4U02 - ? -
20 PsiBlast_PDB 63.3334% -14 - C1 -4YMU 5.1 ?
1 PsiBlast_PDB 63.0228% -23 - C1 -4MKI - ECFA2_CALS4 -
26 PsiBlast_CBE 62.4234% -14 - C1 -4YMU 4.8 ?
27 PsiBlast_CBE 62.2232% 11 - C1 -2PCL - LOLD_AQUAE -
22 PsiBlast_CBE 61.8631% 4 - C1 -1L2T - Y796_METJA -
18 PsiBlast_PDB 61.8034% -8 - C1 -4YMS - ? -
9 PsiBlast_PDB 61.3931% 2 - C1 -1L2T - Y796_METJA -
10 PsiBlast_PDB 61.3631% -2 - C1 -3TIF - Y796_METJA -
25 PsiBlast_CBE 61.0734% -17 - C1 -4YMV 3.9 ?
44 HHSearch 61.0525%-110 - C1 -4AYT - ABCBA_HUMAN -
24 PsiBlast_CBE 60.6734% -10 - C1 -4YMV 6.5 ?
23 PsiBlast_CBE 60.5531% 0 - C1 -3TIF - Y796_METJA -