@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXA1: (2018-01-03 )
MAIQLKLRKKELILNSRILLSSPHMGGTEEKYVAKAFKDNWIAPLGENVDKFEESITKYTGSKGGASALSSGTAAIHLALRLLNVGKNDIVFAPSFTFIATVNPILYQGAVPVFIDSEPNTWNMSPVALESALEEAERNNQLPKAIIVVNLYGQMADYERILAIANQFNVPVIEDAAESLGSTYKGISSGLFGTIGIYSFNGNKIITTSGGGALVSSDKKYVEHSRFLATQARDQAPYYQHSEIGYNYRLSNISAGIGRGQMEVLNDRVAKRREIFNRYKEAFSGIDRIEMMPEVDGMVPNRWLSTLTINDYNSIDQVVNVINKLNEKNIETRALWKPLHLQPVFQGVKMYYHDNNLSVSEKLFNSGLCLPSGSNMTDSEQEFVIDEFKKIFK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4RA_A_2(4ZTC)
PGLE_CAMJE
[Raw transfer]



ULP_A_2(3NYT)
WBPE_PSEAE
[Raw transfer]



UD0_B_6(3NUB)
WBPE_PSEAE
[Raw transfer]



PMP_A_4(3NU7)
WBPE_PSEAE
[Raw transfer]



PMP_B_6(3NU7)
WBPE_PSEAE
[Raw transfer]



PLP_H_8(1O61)
?
[Raw transfer]



PLP_I_9(1O61)
?
[Raw transfer]



X04_C_3(1O69)
?
[Raw transfer]



X04_A_4(1O69)
?
[Raw transfer]



X04_A_4(1O69)
?
[Raw transfer]



X04_A_4(1O69)
?
[Raw transfer]



BME_B_11(1O62)
?
[Raw transfer]
60 Fugue 90.5247% -66 - C1 -1O69 3.3 ?
4 PsiBlast_PDB 88.3547% -61 - C1 -4ZTC 8.4 PGLE_CAMJE
3 PsiBlast_PDB 87.6247% -64 - C1 -1O69 3.3 ?
54 HHSearch 87.4647% -63 - C1 -1O69 3.3 ?
21 PsiBlast_CBE 85.2447% -60 - C1 -1O69 4.0 ?
23 PsiBlast_CBE 84.9147% -60 - C1 -1O61 4.1 ?
22 PsiBlast_CBE 84.4947% -58 - C1 -1O62 2.5 ?
2 PsiBlast_PDB 83.8947% -55 - C1 -1O62 - ? -
1 PsiBlast_PDB 83.7147% -59 - C1 -1O61 4.1 ?
37 HHSearch 82.5132% -80 * C1 *3DR4 - GDPPS_CAUCR -
24 PsiBlast_CBE 82.1033% -79 - C1 -3DR4 - GDPPS_CAUCR -
25 PsiBlast_CBE 81.6933% -80 - C1 -3DR4 - GDPPS_CAUCR -
26 PsiBlast_CBE 81.3333% -78 - C1 -3DR4 - GDPPS_CAUCR -
5 PsiBlast_PDB 80.2933% -77 - C1 -3DR4 - GDPPS_CAUCR -
48 HHSearch 74.1027% -27 - C1 -5UID - ? -
44 HHSearch 73.4528% -67 - C1 -4ZAH - WECE_ECOLI -
51 HHSearch 71.6627% -50 - C1 -4LC3 - ? -
53 HHSearch 70.6927% -50 - C1 -1MDO - ARNB_SALTY -
7 PsiBlast_PDB 69.9631% -31 - C1 -4QGR - ? -
56 HHSearch 69.9326% -50 - C1 -5U23 - ? -