@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXA2: (2018-01-03 )
MDSKTNSLLKYTSDPYIIIGAGGHAKVIIETLRLENKLIYGFFDDKQNKMQDLKYLGKINELNSWADSKKKIYKFIVAIGDCVVRKKIIKKLNMPSEQYGIAVHPSAIVAKEISIGYGTVIFANAVINPDAVIGEHAIINTGSIVEHDCRINNYVHLSPGVCLAGGVHVGVGTQIGIGSQCIQMKKIGSWCMIGAGSTIVKDIPSHSLAYGNPAKIKKEGINFEF

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

JBT_A_2(4EA9)
?
[Raw transfer]




COA_A_3(4EAB)
?
[Raw transfer]




COA_A_2(4EA7)
?
[Raw transfer]




COA_A_3(4EAB)
?
[Raw transfer]




ACO_B_6(4M99)
?
[Raw transfer]




COA_A_2(4EA8)
?
[Raw transfer]




ACO_C_7(4M99)
?
[Raw transfer]




GOL_A_5(5T2Y)
PGLD_CAMJE
[Raw transfer]




7O4_A_2(5TYH)
PGLD_CAMJE
[Raw transfer]




UD4_A_2(3BSS)
PGLD_CAMJE
[Raw transfer]




135 Fugue 88.6936% -84 - C4 -4EAB 3.7 ?
116 HHSearch 88.2237% -77 - C4 -4EAA - ? -
115 HHSearch 86.2237% -85 - C4 -4EA9 - ? -
4 PsiBlast_PDB 84.1136%-149 - C4 -4EAA - ? -
5 PsiBlast_PDB 83.0936%-150 - C4 -4EAB 3.7 ?
1 PsiBlast_PDB 82.8237%-155 - C4 -4EA7 3.8 ?
3 PsiBlast_PDB 82.2537%-153 - C4 -4EA9 8.5 ?
2 PsiBlast_PDB 82.1037%-153 - C4 -4EA8 3.5 ?
119 HHSearch 80.3132% -61 - C4 -4M99 - ? -
117 HHSearch 77.7630%-109 - C4 -2VHE - PGLD_CAMJE -
120 HHSearch 77.3432% -65 - C- -4M98 - ? -
121 HHSearch 76.3126% -83 - C4 -4M9C - ? -
6 PsiBlast_PDB 73.7934% -27 - C4 -4M99 3.9 ?
118 HHSearch 73.5630%-106 - C4 -3BFP - PGLD_CAMJE -
21 PsiBlast_CBE 73.2534% -27 - C4 -4M99 3.3 ?
16 PsiBlast_PDB 72.4826% -71 - C- -4M9C - ? -
136 Fugue 72.2830% -98 - C4 -3BFP - PGLD_CAMJE -
7 PsiBlast_PDB 68.6734% -22 - C- -4M98 - ? -
124 HHSearch 60.9629%-131 - C4 -3R8Y - DAPH_BACAN -
11 PsiBlast_PDB 60.8232% -83 - C4 -3BSW - PGLD_CAMJE -
10 PsiBlast_PDB 60.0232% -73 - C4 -3BSS 3.4 PGLD_CAMJE
13 PsiBlast_PDB 58.9432% -77 - C4 -5T2Y 2.8 PGLD_CAMJE