@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXB8: (2018-01-03 )
MTKILEVKDLEISFDTYAGKVRAIRGVNFHLNKGETLAIVGESGSGKSVTTRSIMRLLSSNANIDAGQILFKGNDIVGKSEREMQKIRGKEIAMIFQDPMTSLDPTMPIGKQVAESLRKHNKVSKKEGQKAALELLKLVGIPEAEKRINSYPHQFSGGQRQRIVIAIALVCYPEILIADEPTTALDVTIQAQILELLKEIQTKIDTSIIFITHDLGVVANVADRVAVMYGGRIVEVGTSEEIFYNPQHPYTWGLLGSMPTLDSANDRLYAIPGSPPDLLNPPKGDAFYPRNEFAMKIDAEQEPPFFELSKTHKAATWLLAPQAPKVTPPEEIQRRWAIFKEKQKHTYGQGGIADAK

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_3(4FWI)
?
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_B_5(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]




ADP_D_8(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_B_6(3B5Z)
MSBA_SALTY
[Raw transfer]




115 HHSearch 88.0741% -67 - C1 -4FWI - ? -
1 PsiBlast_PDB 84.6041% -52 - C1 -4FWI 5.8 ?
24 PsiBlast_CBE 73.6133%-139 - C1 -3C4J 5.1 ?
4 PsiBlast_PDB 73.0533%-138 - C1 -2OLJ 5.9 ?
11 PsiBlast_PDB 73.0435%-142 - C1 -3TUI - METN_ECOLI -
30 PsiBlast_CBE 72.8433%-136 - C1 -2OLK 5.9 ?
12 PsiBlast_PDB 72.6535%-148 - C1 -3TUZ - METN_ECOLI -
119 HHSearch 72.2533%-143 - C1 -3TUI - METN_ECOLI -
6 PsiBlast_PDB 72.2533%-138 - C1 -2OUK - ? -
29 PsiBlast_CBE 71.6933%-135 - C1 -2OLK 5.8 ?
5 PsiBlast_PDB 71.5433%-138 - C1 -2OLK - ? -
8 PsiBlast_PDB 71.4833%-133 - C1 -3C4J 6.4 ?
35 PsiBlast_CBE 71.0235%-145 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 70.8533%-137 - C1 -2Q0H - ? -
33 PsiBlast_CBE 70.6733%-135 - C1 -3C41 5.8 ?
31 PsiBlast_CBE 70.6533%-135 - C1 -2OLK - ? -
7 PsiBlast_PDB 69.9933%-133 - C1 -2Q0H - ? -
107 Fugue 69.8227%-109 - C1 -3TUZ - METN_ECOLI -
37 PsiBlast_CBE 69.8235%-149 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 69.4734%-118 - C1 -4U02 - ? -
99 PsiBlast_CBE 28.2332% - - C1 -3B5Z 2.9 MSBA_SALTY
100 PsiBlast_CBE 28.2232% - - C1 -3B5Z 2.3 MSBA_SALTY
98 PsiBlast_CBE 28.2232% - - C1 -3B5Z 2.3 MSBA_SALTY
103 PsiBlast_CBE 28.1932% - - C1 -3B5Y 1.9 MSBA_SALTY
104 PsiBlast_CBE 28.1832% - - C1 -3B5Y 2.1 MSBA_SALTY
102 PsiBlast_CBE 28.1632% - - C1 -3B5Y 1.9 MSBA_SALTY
97 PsiBlast_CBE 27.8732% - - C1 -3B5Z 2.5 MSBA_SALTY
101 PsiBlast_CBE 27.7932% - - C1 -3B5Y 1.9 MSBA_SALTY
90 PsiBlast_CBE 26.2031% 9 - C1 -1XEF 5.1 HLYBP_ECOLX
86 PsiBlast_CBE 25.6231% 12 - C1 -2FGJ 5.7 HLYBP_ECOLX
89 PsiBlast_CBE 25.5831% 12 - C1 -1XEF 5.3
85 PsiBlast_CBE 25.4331% 7 - C1 -2FGJ 5.3 HLYBP_ECOLX
77 PsiBlast_CBE 25.2531% 8 - C1 -2FGK 5.6 HLYBP_ECOLX
91 PsiBlast_CBE 25.0731% 9 - C1 -1XEF 5.8 HLYBP_ECOLX
55 PsiBlast_CBE 24.9932% 6 - C1 -2PMK 4.8
92 PsiBlast_CBE 24.7231% 10 - C1 -1XEF 4.6 HLYBP_ECOLX
87 PsiBlast_CBE 24.0831% 10 - C1 -2FGJ 5.5 HLYBP_ECOLX
75 PsiBlast_CBE 23.8531% 8 - C1 -2FGK 4.9 HLYBP_ECOLX
56 PsiBlast_CBE 23.7932% 13 - C1 -2FF7 4.7
73 PsiBlast_CBE 23.6431% 11 - C1 -3B5J 5.0
88 PsiBlast_CBE 23.4831% 13 - C1 -2FFA 4.9
84 PsiBlast_CBE 22.8831% 17 - C1 -2FGJ 5.0
76 PsiBlast_CBE 22.3431% 8 - C1 -2FGK 5.6 HLYBP_ECOLX
74 PsiBlast_CBE 20.7431% 9 - C1 -2FGK 5.7