@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXC3: (2018-01-03 )
MAEKETFYITTPIYYPSGKLHIGNSYTTIACDAIARYKRLMGFDVFYLTGVDEHGQKIETKAEELGVKPQEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYSVSDEEFFTETQLAEVYKDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYADRLLEYYEEHPEFIQPESRKNEMINNFIKPGLEDLAVSRTTFTWGVPVKSDPKHVVYVWIDALSNYITALGYGSEDESLFEKYWPADVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAVPFGSDGVFTPEDFVSRVNYDLANDLGNLLNRTIAMINKYCDGLVPDYASLVTPFDSELSTTAANVVGRYHDAMEKMEFNTALAEIWVLISRANKYIDETEPWVLAKDEEKKAELNSVMIHLAESLRIAAILLQPIMTETPEKIFNQLGLDSETMNLEGLHFGEFPSGTKVVAKGTPIFPRLDMEEEVAFIQEKMSEGTQTNEDTVKWDPEETELVSTKEKQIKFDVFEKVELKVAEVINCQKVEGADKLLQFRLDAGDSQDRQILSGIAEFYPDPSELIGKKVVIVANLKPRKMRGQISQGMILSAEAPDGSLQVIEAPKSMPNGSEIA

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3BJ_A_3(4QRD)
?
[Raw transfer]




4RN_B_14(4ZT5)
?
[Raw transfer]




4RP_B_10(4ZT2)
?
[Raw transfer]




4RC_B_7(4ZT7)
?
[Raw transfer]




I53_B_4(5TQU)
?
[Raw transfer]




4RO_B_9(4ZT4)
?
[Raw transfer]




4RQ_B_15(4ZT3)
?
[Raw transfer]




3BG_A_2(4QRE)
?
[Raw transfer]




3BG_A_2(4QRE)
?
[Raw transfer]




N56_B_10(5J58)
?
[Raw transfer]




4RD_B_8(4ZT6)
?
[Raw transfer]




N93_B_5(5J59)
?
[Raw transfer]




2EJ_B_15(4MW9)
?
[Raw transfer]




ME8_A_2(3KFL)
?
[Raw transfer]




ME8_A_2(3KFL)
?
[Raw transfer]




756_B_4(5J5A)
?
[Raw transfer]




EDO_A_6(3KFL)
?
[Raw transfer]




EDO_A_7(3KFL)
?
[Raw transfer]




28 PsiBlast_CBE 88.9645%-113 - C2 -4PY2 - ? -
9 PsiBlast_PDB 88.1645%-117 - C2 -5K0T - SYM_BRUSU -
8 PsiBlast_PDB 88.1345%-115 - C2 -5K0S - SYM_BRUSU -
26 PsiBlast_CBE 88.0945%-116 - C2 -5K0S - SYM_BRUSU -
7 PsiBlast_PDB 88.0445%-114 - C2 -4PY2 - ? -
1 PsiBlast_PDB 87.0263% -33 - C2 -4QRD 9.0 ?
29 PsiBlast_CBE 86.9645%-116 - C2 -4PY2 - ? -
24 PsiBlast_CBE 86.8645%-121 - C2 -5K0T - SYM_BRUSU -
2 PsiBlast_PDB 86.6263% -36 - C2 -4QRE 9.7 ?
27 PsiBlast_CBE 86.5745%-117 - C2 -5K0S - SYM_BRUSU -
25 PsiBlast_CBE 86.3145%-123 - C2 -5K0T - SYM_BRUSU -
6 PsiBlast_PDB 85.5745%-112 - C2 -4DLP - ? -
3 PsiBlast_PDB 85.2345% -88 - C2 -2X1L - ? -
4 PsiBlast_PDB 84.3645% -87 - C2 -2X1M - ? -
83 HHSearch 83.5864% -14 - C2 -4QRE 9.7 ?
22 PsiBlast_CBE 83.5745% -95 - C2 -2X1L - ? -
21 PsiBlast_CBE 82.5545% -96 - C2 -2X1L - ? -
85 HHSearch 78.9141% -69 - C2 -2D5B - SYM_THET8 -
81 HHSearch 78.8350% -45 * C2 *2CT8 - SYM_AQUAE -
86 HHSearch 78.1240% -69 - C2 -1A8H - SYM_THET8 -
44 PsiBlast_CBE 75.2038% -35 - C2 -4ZT4 6.7 ?
36 PsiBlast_CBE 74.2238% -38 - C2 -4MW9 6.1 ?
48 PsiBlast_CBE 74.1438% -35 - C2 -4ZT2 7.1 ?
46 PsiBlast_CBE 73.8938% -36 - C2 -4ZT3 6.8 ?
38 PsiBlast_CBE 73.8838% -33 - C2 -4ZT7 8.0 ?
34 PsiBlast_CBE 73.1738% -35 - C2 -5J59 7.8 ?
33 PsiBlast_CBE 72.9538% -36 - C2 -5J5A 7.2 ?
42 PsiBlast_CBE 72.4838% -36 - C2 -4ZT5 7.3 ?
35 PsiBlast_CBE 72.4138% -34 - C2 -5J58 7.6 ?
32 PsiBlast_CBE 72.2238% -40 - C2 -5TQU 8.0 ?
40 PsiBlast_CBE 72.0138% -33 - C2 -4ZT6 8.0 ?
15 PsiBlast_PDB 71.6338% -22 - C2 -3KFL 9.3 ?
75 HHSearch 68.4738% -5 - C2 -3KFL 9.3 ?