@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXE6: (2018-01-03 )
MAEIVKVTHLKKSFGRFEALKDVSFTVHSGEVVGFIGPNGSGKSTTIRTLLGIIKKDGGTATIFGQDVWEDSLSIHERLSYVPGDISLWGNLTGGAIIDLFMKLHGKGSAQKKDELIQRFSLDPKKKAKNYSKGNRQKVGLIAALAVDSDLYLFDEPTSGLDPLMETIFQEEVEKLKEQGKSILLSSHILSEVERLADKVVIIREGTLDEEGTLDELRHLTRSTITIETEAENSHLAQLNGVHDFVQKGHLAQFAADNEAFDVILAEASKLGVKKFESIPPTLEDLFMRHYEG

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



GOL_B_11(4P33)
LPTB_ECOLI
[Raw transfer]
3 PsiBlast_PDB 88.3831% -18 - C1 -4YER 6.6 ?
1 PsiBlast_PDB 82.1834% -33 - C1 -1VPL - ? -
2 PsiBlast_PDB 80.1833% -28 - C1 -4RVC - ? -
65 Fugue 72.0025% -4 - C1 -5DO7 - ABCG5_HUMAN -
9 PsiBlast_PDB 70.4231% -28 - C1 -4WBS - ? -
15 PsiBlast_PDB 69.1231% -14 - C1 -2OLJ - ? -
38 HHSearch 69.0827% -12 - C1 -3RLF - MALK_ECOLI -
29 PsiBlast_CBE 68.6331% -19 - C1 -2OLK 6.2 ?
16 PsiBlast_PDB 68.6231% -18 - C1 -2OLK 5.8 ?
17 PsiBlast_PDB 67.7231% -16 - C1 -2OUK - ? -
27 PsiBlast_CBE 67.6831% -16 - C1 -2OLK 5.9 ?
14 PsiBlast_PDB 67.6329% -6 - C1 -4YMW - ? -
37 HHSearch 67.4927% -10 - C1 -2AWN - MALK_ECOLI -
30 PsiBlast_CBE 67.4731% -18 - C1 -2OLJ 5.7 ?
19 PsiBlast_PDB 67.4631% -23 - C1 -3C4J 6.3 ?
11 PsiBlast_PDB 67.4229% -6 - C1 -4YMT - ? -
20 PsiBlast_PDB 67.1830% -20 - C1 -4U00 - ? -
13 PsiBlast_PDB 67.1129% -6 - C1 -4YMV 4.7 ?
12 PsiBlast_PDB 67.0629% -2 - C1 -4YMU 6.0 ?
22 PsiBlast_CBE 66.2131% -17 - C1 -3C4J 5.2 ?
23 PsiBlast_CBE 65.4731% -21 - C1 -2Q0H 5.7 ?
28 PsiBlast_CBE 65.2331% -14 - C1 -2OLK 6.1 ?
18 PsiBlast_PDB 64.6431% -16 - C1 -2Q0H 5.4 ?
32 PsiBlast_CBE 63.2331% -18 - C1 -3C41 6.1 ?
31 PsiBlast_CBE 62.5531% -14 - C1 -3C41 5.5 ?
35 HHSearch 50.7530% 34 - C1 -4YER 5.1 ?